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Job DescriptionP06721
Confidence99.67%DateWed Jan 25 15:20:11 GMT 2012
Rank234Aligned Residues301
% Identity15%Templatec2cjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:l-lysine-epsilon aminotransferase; PDBTitle: lysine aminotransferase from m. tuberculosis in external2 aldimine form
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70....... ..80.........90........ .100.........110...
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Query Sequence  GELFYGRRGTLTHFSLQQAMCELEGG. . . AGCVLFPCGAAAVANSILAFI. . . . . . . . . . . . . . EQGDHVLMTNTAYEP.
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Template Sequence  NKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGR
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TTT




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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   114.....120.........130... ......140.........150.........160.....
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Query Sequence  . . . . . . . . . SQDFCSKILSKLGVTTSWFD. . . . . . . . . . . . . . . . . . PLIGADIVKHLQPNTKIVFLESPGSITMEVHD.
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Template Sequence  SGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFR
Template Known Secondary structure  STTGGGT

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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   166...170.........180......... 190.........200.........210.........220.........230........
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Query Sequence  . . . VPAIVAAVRSVVPDAIIMIDNTWA. . . . AGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAY
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Template Sequence  PEFFAAMRELCDEF. . DALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQV. CGVMAGRRVDEVADNVFAVPSRL
Template Known Secondary structure  T..T

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   251........260.... .....270.........280.........290.........300.... .....310.........320.......
 
   239240.........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  LMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKK
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Template Sequence  NSTWGGNLTDMVRARRILEVIEA. . EGLFERAVQHGKYLRARLDELAADFPAV. . . . . . . . . VLDPRGRGLMCAFSLP. .
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   328.330.........340.........350 .........360.........370........ .380.........390....
 
   319320.........330.........340.........350.........360.........370....... ..380.........390....
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Query Sequence  LNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGL. . . . EDVDDLIADLDAGFARI
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Template Sequence  . TTADRDELIRQLWQRAVIVLPAG. . . . . . . . . . . . . . . . . . . . . . . . . ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV
Template Known Secondary structure  .STT
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   395....400.........410....... ..420.........430.........440........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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