Job Description P06721 Confidence 100.00% Date Wed Jan 25 15:20:11 GMT 2012 Rank 25 Aligned Residues 334 % Identity 14% Template c2c7tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine-2-deoxy-scyllo-inosose PDBTitle: crystal structure of the plp-bound form of btrr,2 a dual functional aminotransferase involved in butirosin3 biosynthesis. Resolution 2.1 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	G	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	.	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D	F	C
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		R	K	I	E	E	V	F	Q	S	N	R	W	A	I	S	G	Y	W	T	G	E	E	S	M	E	R	K	F	A	K	A	F	A	D	F	N	G	V	P	Y	C	V	P	T	T	S	G	S	T	A	L	M	L	A	L	E	A	L	G	I	G	E	G	D	E	V	I	V	P	S	L	T	W	I	A	T	A	T	A	V
Template Known Secondary structure											T			S	T	T	S	B			S	S																T		S						S													T	T			T	T							S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V
Query Conservation																			.	.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.																		.	.	.																						.	.
Template Conservation		.	.	.	.																																					.	.	.																						.	.
Template Sequence		.	.	.	.	L	N	V	N	A	L	P	V	F	V	D	V	E	A	D	T	Y	C	I	D	P	Q	L	I	K	S	A	I	T	D	K	T	K	A	I	I	.	.	.	P	V	H	L	F	G	S	M	A	N	M	D	E	I	N	E	I	A	Q	E	H	.	.	N	L	F	V	I	E	D	C	A	Q	S	H	G	S
Template Known Secondary structure		.	.	.	.			T	T								B		T	T	T		S	B											T	T						.	.	.		B			T	T																.	.	T								T	T		T	T
Template Predicted Secondary structure		.	.	.	.																																					.	.	.																						.	.
Template SS confidence
						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170
		193	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.																											.	240	.	.	.	.
Predicted Secondary structure										.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	K	A	L	D	F	G	.	.	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	G	Q	M	V
Query Conservation										.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	W	N	N	Q	R	A	G	T	I	G	D	I	G	A	F	S	C	Q	Q	G	K	V	L	T	A	G	E	G	G	I	I	V	T	K	N	P	R	L	F	E	L	I	Q	Q	L	R	A	D	S	R	V	Y	C	D	D	S	S	E	L	M	H	G	D	M	Q	L	V	K	K	G	D	I	Q	G	S	N	Y	C	L
Template Known Secondary structure				T	T			T	T	S	S	S	S								T	T	S	S	S		S	S	S							S													B	T	T					S		T	T	S			T	T		B	S						S	S				B
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.					.	.	.	320
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		D	A	D	T	A	Y	I	T	S	R	G	L	R	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	.	.	.	.	K	K	L	N
Query Conservation																																																																										.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	F	Q	S	A	I	L	L	D	Q	L	Q	E	L	D	D	K	N	A	I	R	E	K	N	A	M	F	L	N	D	A	L	S	K	I	D	G	I	K	V	M	K	R	P	.	.	.	.	.	.	.	.	.	.	.	P	Q	V	S	R	Q	T	Y	Y	G	Y	V	F	R	F	D	P	V	K	F	G	G	L	N
Template Known Secondary structure														T	T																				T	T	S	T	T								.	.	.	.	.	.	.	.	.	.	.	T	T							S								G	G	G	T	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.												.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330																			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Query Sequence		N	E	E	L	A	N	Y	L	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	.	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.															.
Template Conservation																																																																.	.
Template Sequence		A	D	Q	F	C	E	I	L	R	E	K	L	N	M	G	T	F	Y	L	H	P	P	Y	L	P	V	H	K	N	P	L	F	C	P	W	T	K	N	R	Y	L	K	S	V	R	K	T	E	A	Y	W	R	G	L	H	Y	P	V	S	E	R	A	.	.	S	G	Q	S	I	V	I	H	H	A	I	L	L	A	E	P
Template Known Secondary structure														T			T	T	T								G	G	G		T	T			G	G	G		T	T	S													T										.	.	T	T	S						G	G	G	G	G	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	A	D	L	D	A	G	F	A	R	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	L	S	L	L	V	D	A	V	A	E	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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