Return to main results Retrieve Phyre Job Id

Job DescriptionP19381
Confidence11.46%DateThu Jan 5 11:37:20 GMT 2012
Rank14Aligned Residues50
% Identity28%Templatec3nicA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:eco29kir; PDBTitle: dna binding and cleavage by the giy-yig endonuclease r.eco29ki2 inactive variant y49f
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110.........120..
Predicted Secondary structure 






















Query SS confidence 

















































Query Sequence  NKSLDHSEITFRHLAFFCTIYHLHQSDRTDAHSPLVQVKTFPDTGGFVLY
Query Conservation 

 
 



 
 




 

  


 

 
 








 

 
 

 
Alig confidence 

















































Template Conservation                    
 
  
     



 




 
 







Template Sequence  NKKFDRSEHVYRNDSFLELIKDAVRFFSGTPVHSLPPPERFQGAGVFALY
Template Known Secondary structure 
S


GGGG



TTTS

SS
SS




Template Predicted Secondary structure 






















Template SS confidence 

















































   3......10.........20.........30.........40.........50..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions