Job Description P0A8D6 Confidence 100.00% Date Thu Jan 5 11:07:34 GMT 2012 Rank 17 Aligned Residues 157 % Identity 28% Template c3gqeA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 3; PDBTitle: crystal structure of macro domain of venezuelan equine encephalitis2 virus Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	I	H	V	V	Q	G	D	I	T	K	L	A	V	D	V	I	V	N	A	A	N	P	S	L	M	G	G	G	G	V	D	G	A	I	H	R	A	A	G	P	A	L	L	D	A	C	L	K	V	R	Q	Q	Q	G	D	C	P	T	G	H	A	V	I	T	L	A	G	D	L	P	A	K	A	V	V	H	T	V
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.																.	.	.
Template Sequence		P	S	Y	H	V	V	R	G	D	I	A	T	A	T	E	G	V	I	I	N	A	A	N	S	K	G	Q	P	G	G	G	V	C	G	A	L	Y	K	K	F	P	E	S	F	.	.	.	.	.	.	.	.	.	D	L	Q	P	I	E	V	G	K	A	R	L	V	K	G	.	.	.	A	A	K	H	I	I	H	A	V
Template Known Secondary structure									S		G	G	G			S	S								T	T	S			T	T	G	G	G	S							G	G	G		.	.	.	.	.	.	.	.	.							T	T								.	.	.	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	P	V	W	R	G	G	E	Q	.	N	E	D	Q	L	L	Q	D	A	Y	L	N	S	L	R	L	V	A	A	N	S	Y	T	S	V	A	F	P	A	I	S	T	G	V	Y	G	Y	P	R	A	A	A	A	E	I	A	V	K	T	V	S	E	F	I	T	R	H	A	L	P	E	Q	V	Y	F	V	C	Y	D	E
Query Conservation											.
Alig confidence											.																																															.											.	.
Template Conservation																																																										.											.	.
Template Sequence		G	P	N	F	N	K	V	S	E	V	E	G	D	K	Q	L	A	E	A	Y	E	S	I	A	K	I	V	N	D	N	N	Y	K	S	V	A	I	P	L	L	S	T	G	I	F	S	G	N	K	D	R	L	T	Q	S	L	.	N	H	L	L	T	A	L	D	T	T	.	.	D	A	D	V	A	I	Y	C	R	D	K
Template Known Secondary structure					T	T	T	S																							T	T		S							T	T	S	S	T	T	S		S	S								.								T	T	S	.	.									S
Template Predicted Secondary structure																																																										.											.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	H	L	Y	E	R	L	L	T	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	W	E	M	T	L	K	E	A	V	A	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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