Job Description P0A8D6 Confidence 100.00% Date Thu Jan 5 11:07:34 GMT 2012 Rank 5 Aligned Residues 172 % Identity 24% Template c2xd7B_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:core histone macro-h2a.2; PDBTitle: crystal structure of the macro domain of human core histone2 h2a Resolution 2.09 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		M	K	T	R	I	H	V	V	Q	G	D	I	T	K	.	.	.	L	A	V	D	V	I	V	N	A	A	N	P	S	L	M	G	G	G	G	V	D	G	A	I	H	R	A	A	G	P	A	L	L	D	A	C	L	K	V	R	Q	Q	Q	G	D	C	P	T	G	H	A	V	I	T	L	A	G	D	L	P	A	K	A
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		L	G	Q	K	L	S	L	T	Q	S	D	I	S	H	I	G	S	M	R	V	E	G	I	V	H	P	T	T	A	E	I	D	L	K	E	D	I	G	K	A	L	E	K	A	G	G	K	E	F	L	E	T	V	K	E	L	R	K	S	Q	G	P	L	E	V	A	E	A	A	V	S	Q	S	S	G	L	A	A	K	F
Template Known Secondary structure		T	S										G	G	G	G	G	G				S								T	T					S																									T		S			T	T								T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		V	V	H	T	V	G	P	V	W	R	G	G	E	Q	N	E	D	Q	L	L	Q	D	A	Y	L	N	S	L	R	L	V	A	A	N	S	Y	T	S	V	A	F	P	A	I	S	T	G	V	Y	G	Y	P	R	A	A	A	A	E	I	A	V	K	T	V	S	E	F	I	T	R	H	.	.	A	L	P	E	Q	V	Y
Query Conservation																																																																									.	.
Alig confidence											.	.																																																													.	.
Template Conservation											.	.
Template Sequence		V	I	H	C	H	I	P	Q	W	.	.	G	S	D	K	C	E	E	Q	L	E	E	T	I	K	N	C	L	S	A	A	E	D	K	K	L	K	S	V	A	F	P	P	F	P	S	G	R	N	C	F	P	K	Q	T	A	A	Q	V	T	L	K	A	I	S	A	H	F	D	D	S	S	A	S	S	L	K	N	V	Y
Template Known Secondary structure										T	.	.	T	S	T	T																			T	T		S										S	S	S																							S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	C	Y	D	E	E	N	A	H	L	Y	E	R	L	L	T	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	L	F	D	S	E	S	I	G	I	Y	V	Q	E	M	A	K	L
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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