Job Description P0A8D6 Confidence 100.00% Date Thu Jan 5 11:07:34 GMT 2012 Rank 2 Aligned Residues 172 % Identity 47% Template c2x47A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:macro domain-containing protein 1; PDBTitle: crystal structure of human macrod1 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	R	I	H	V	V	Q	G	D	I	T	K	L	A	V	D	V	I	V	N	A	A	N	P	S	L	M	G	G	G	G	V	D	G	A	I	H	R	A	A	G	P	A	L	L	D	A	C	L	K	V	R	Q	Q	Q	G	D	C	P	T	G	H	A	V	I	T	L	A	G	D	L	P	A	K	A	V	V	H
Query Conservation
Alig confidence																																																				.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		L	N	E	K	I	S	L	L	R	S	D	I	T	K	L	E	V	D	A	I	V	N	A	A	N	S	S	L	L	G	G	G	G	V	D	G	C	I	H	R	A	A	G	P	L	L	T	D	E	C	.	.	.	.	R	T	L	Q	S	C	K	T	G	K	A	K	I	T	G	G	Y	R	L	P	A	K	Y	V	I	H
Template Known Secondary structure				T	T						S		G	G	G			S	S								T	T		S			S																			.	.	.	.		T	S					B	T								T	T	S	S	S	S
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																										.
Query SS confidence													.																																																										.
Query Sequence		T	V	G	P	V	W	R	G	G	E	Q	.	N	E	D	Q	L	L	Q	D	A	Y	L	N	S	L	R	L	V	A	A	N	S	Y	T	S	V	A	F	P	A	I	S	T	G	V	Y	G	Y	P	R	A	A	A	A	E	I	A	V	K	T	V	S	E	F	I	T	R	H	.	A	L	P	E	Q	V	Y	F	V	C
Query Conservation													.																																																										.
Alig confidence													.																																																										.
Template Conservation
Template Sequence		T	V	G	P	I	A	Y	G	E	P	S	A	S	Q	A	A	E	L	R	S	C	Y	L	S	S	L	D	L	L	L	E	H	R	L	R	S	V	A	F	P	C	I	S	T	G	V	F	G	Y	P	C	E	A	A	A	E	I	V	L	A	T	L	R	E	W	L	E	Q	H	K	D	K	V	D	R	L	I	I	C	V
Template Known Secondary structure			B					T	T																								T	T									T	T		S	T	T	S																						G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	E	E	N	A	H	L	Y	E	R	L	L	T	Q	Q	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	E	K	D	E	D	I	Y	R	S	R	L	P	H	Y	F	P
Template Known Secondary structure			S															S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions