Job Description P0A8D6 Confidence 100.00% Date Thu Jan 5 11:07:34 GMT 2012 Rank 13 Aligned Residues 154 % Identity 26% Template c2vriA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 3; PDBTitle: structure of the nsp3 x-domain of human coronavirus nl63 Resolution 1.8 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		K	T	R	I	H	V	V	Q	G	D	I	T	K	L	.	.	.	.	A	V	D	V	I	V	N	A	A	N	P	S	L	M	G	G	G	G	V	D	G	A	I	H	R	A	A	G	P	A	L	L	D	A	C	L	K	V	R	Q	Q	Q	G	D	C	P	T	G	H	A	V	I	T	L	A	G	D	L	P	A	K	A
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																																																												.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Y	K	N	V	K	F	Y	L	G	D	I	S	H	L	V	N	C	V	S	F	D	F	V	V	N	A	A	N	E	N	L	L	H	G	G	G	V	A	R	A	I	D	I	L	T	E	G	Q	L	Q	S	L	S	K	D	Y	I	S	S	N	G	P	L	K	V	G	A	G	V	M	L	E	C	E	K	F	N	.	.	.
Template Known Secondary structure			T	T						S						T	T	T	S			S								T	T					S										T	T	T															S			T	T								S	S			.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	H	T	V	G	P	V	W	R	G	G	E	Q	N	E	D	Q	L	L	Q	D	A	Y	L	N	S	L	R	L	V	A	A	N	S	Y	T	S	V	A	F	P	A	I	S	T	G	V	Y	G	Y	P	R	A	A	A	A	E	I	A	V	K	T	V	S	E	F	I	T	R	H	A	L	P	E	Q	V	Y	F	V
Query Conservation
Alig confidence												.	.	.																.	.	.	.	.																																.	.	.	.	.
Template Conservation												.	.	.																.	.	.	.	.																																.	.	.	.	.
Template Sequence		V	F	N	V	V	G	P	R	T	G	.	.	.	K	H	E	H	S	L	L	V	E	A	Y	N	S	I	L	.	.	.	.	.	F	E	N	G	I	P	L	M	P	L	L	S	C	G	I	F	G	V	R	I	E	N	S	L	K	A	L	F	S	C	D	.	.	.	.	.	I	N	K	P	L	Q	V	F	V	Y	S
Template Known Secondary structure										S	S	.	.	.	T	T														.	.	.	.	.		S	S	S							S	S		G	G	G													T	S		.	.	.	.	.			S								S
Template Predicted Secondary structure												.	.	.																.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	D	E	E	N	A	H	L	Y	E	R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	E	E	Q	A	V	L	K	F	L	D	G	L
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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