Job Description P0A6Y8 Confidence 100.00% Date Thu Jan 5 11:04:15 GMT 2012 Rank 5 Aligned Residues 374 % Identity 54% Template c3iucC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:heat shock 70kda protein 5 (glucose-regulated PDBTitle: crystal structure of the human 70kda heat shock protein 52 (bip/grp78) atpase domain in complex with adp Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	K	I	I	G	I	D	L	G	T	T	N	S	C	V	A	I	M	D	G	T	T	P	R	V	L	E	N	A	E	G	D	R	T	T	P	S	I	I	A	Y	T	Q	D	G	E	T	L	V	G	Q	P	A	K	R	Q	A	V	T	N	P	Q	N	T	L	F	A	I	K	R	L	I	G	R	R	F	Q	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	T	V	V	G	I	D	L	G	T	T	Y	S	C	V	G	V	F	K	N	G	R	V	E	I	I	A	N	D	Q	G	N	R	I	T	P	S	Y	V	A	F	T	P	E	G	E	R	L	I	G	D	A	A	K	N	Q	L	T	S	N	P	E	N	T	V	F	D	A	K	R	L	I	G	R	T	W	N	D	P
Template Known Secondary structure		B										S	S									T	T								T	T	S		S	S									T	T	S					T					T	T	T	T	T		S	T	T					G	G	G	T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		E	V	Q	R	D	V	S	I	M	P	F	K	I	I	A	A	D	N	G	D	A	W	V	E	V	K	G	Q	.	.	.	.	K	M	A	P	P	Q	I	S	A	E	V	L	K	K	M	K	K	T	A	E	D	Y	L	G	E	P	V	T	E	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		S	V	Q	Q	D	I	K	F	L	P	F	K	V	V	E	K	K	T	K	P	Y	I	Q	V	D	I	G	G	G	Q	T	K	T	F	A	P	E	E	I	S	A	M	V	L	T	K	M	K	E	T	A	E	A	Y	L	G	K	K	V	T	H	A	V	V	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D
Template Known Secondary structure								T	T		S	S						T	T									S	T	T																											T	S	B										T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	I	A	G	L	E	V	K	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L	D	K	G	T	G	N	R	T	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	I	E	I	D	E	V	D	G	E	K	T	F	E	V	L	A	T	N	G	D	T	H	L	G	G	E	D	F	D	S	R	L
Query Conservation
Alig confidence																												.	.																												.	.	.	.
Template Conservation																												.	.																												.	.	.	.
Template Sequence		A	G	T	I	A	G	L	N	V	M	R	I	I	N	E	P	T	A	A	A	I	A	Y	G	L	D	.	.	K	G	E	K	N	I	L	V	F	D	L	G	G	G	T	F	D	V	S	L	L	T	I	D	N	G	V	.	.	.	.	F	E	V	V	A	T	N	G	D	T	H	L	G	G	E	D	F	D	Q	R	V
Template Known Secondary structure							T																	T	T	T	T	.	.													S	S											T	T		.	.	.	.										T	T		S
Template Predicted Secondary structure																												.	.																												.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	Y	L	V	E	E	F	K	K	D	Q	G	I	D	L	R	N	D	P	L	A	M	Q	R	L	K	E	A	A	E	K	A	K	I	E	L	S	S	A	Q	Q	T	D	V	N	L	P	Y	I	T	A	D	A	T	G	P	K	H	M	N	I	K	V	T	R	A	K	L	E	S	L	V	E	D	L	V	N	R	S
Query Conservation
Alig confidence																																																							.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		M	E	H	F	I	K	L	Y	K	K	K	T	G	K	D	V	R	K	D	N	R	A	V	Q	K	L	R	R	E	V	E	K	A	K	R	A	L	S	S	Q	H	Q	A	R	I	E	I	E	S	F	Y	E	G	.	.	.	.	E	D	F	S	E	T	L	T	R	A	K	F	E	E	L	N	M	D	L	F	R	S	T
Template Known Secondary structure														S				T	T																				T	T	S	S											T	T	.	.	.	.																T						T	T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		I	E	P	L	K	V	A	L	Q	D	A	G	L	S	V	S	D	I	D	D	V	I	L	V	G	G	Q	T	R	M	P	M	V	Q	K	K	V	A	E	F	F	G	.	K	E	P	R	K	D	V	N	P	D	E	A	V	A	I	G	A	A	V	Q	G	G	V	L	T	G
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		M	K	P	V	Q	K	V	L	E	D	S	D	L	K	K	S	D	I	D	E	I	V	L	V	G	G	S	T	R	I	P	K	I	Q	Q	L	V	K	E	F	F	N	G	K	E	P	S	R	G	I	N	P	D	E	A	V	A	Y	G	A	A	V	Q	A	G	V	L	S	G
Template Known Secondary structure												T	T			G	G	G								S	G	G	G	G												T	T	T						S	S		T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions