Phyre 2 alignment of P0A6Y8 with c3cerD

Job Description P0A6Y8
Confidence 97.22% Date Thu Jan 5 11:04:15 GMT 2012

Rank 88 Aligned Residues 241

% Identity 15% Template c3cerD_

PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:possible exopolyphosphatase-like protein; PDBTitle: crystal structure of the exopolyphosphatase-like protein2 q8g5j2. northeast structural genomics consortium target3 blr13

Resolution 2.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence	M	G	K	I	I	G	I	D	L	G	T	T	N	S	C	V	A	I	M	D	G	T	T	P	R	V	L	E	N	A	E	G	D	R	T	T	P	S	I	I	A	Y	T	Q	D	G	E	T	L	V	G	Q	P	A	K	R	Q	A	V	T	N	P	Q	N	T	L	F	A	I	K	R	L	I	G	R	R	F	Q	D	E
Query Conservation
Alig confidence			.																										.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.																										.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	T	.	V	A	G	I	D	C	G	T	N	S	I	R	L	K	I	A	R	V	D	A	D	G	X	H	E	.	.	.	.	.	.	.	.	.	.	.	V	V	P	R	I	L	R	V	I	R	L	G	Q	D	V	D	K	T	H	R	F	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			.								S	S											T	T					.	.	.	.	.	.	.	.	.	.	.											T	T	T	T						S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.																										.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	16	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence	E	V	Q	R	D	V	S	I	M	P	F	K	I	I	A	A	D	N	G	D	A	W	V	E	V	K	G	Q	K	M	A	P	P	Q	I	S	A	E	V	L	K	K	M	K	K	T	A	E	D	Y	L	G	E	P	V	T	E	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R	I
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	E	R	A	Y	V	A	A	R	E	F	A	G	V	I	A	E	H	.	P	I	D	G	L	R	F	V	A	T	S	A	T	R	D	A	E	N	R	E	E	F	E	D	E	I	E	R	I
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	S	.			S														T	T
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
																															66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence	A	G	L	E	V	K	R	I	I	N	E	P	T	A	A	A	L	A	Y	.	.	.	.	.	G	L	D	K	G	T	G	N	R	T	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	I	E	I	D	E	V	D	G	E	K	T	F	E	V	L	A	T	N	G	D	T	H	L	G	G	E	D	F	D	S	R
Query Conservation																				.	.	.	.	.
Alig confidence						.														.	.	.	.	.																																								.	.	.								.	.	.	.	.	.	.
Template Conservation						.																																																										.	.	.								.	.	.	.	.	.	.
Template Sequence	L	G	V	R	P	.	E	V	I	P	G	T	E	E	A	D	L	S	F	L	G	A	T	S	V	V	N	R	D	D	L	P	A	P	Y	L	V	V	D	L	G	G	G	S	T	E	L	V	I	G	G	D	G	V	S	A	P	T	T	Q	V	Q	G	.	.	.	A	F	S	X	N	I	G	.	.	.	.	.	.	.
Template Known Secondary structure		S	S			.																			S	S			T	T	S		S	S								S	S										S	S	S	S		T	T	S				.	.	.					S			.	.	.	.	.	.	.
Template Predicted Secondary structure						.																																																										.	.	.								.	.	.	.	.	.	.
Template SS confidence
	115	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.

	236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.												.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence	L	I	N	Y	L	V	E	E	F	K	K	D	Q	G	I	D	L	R	N	D	P	L	A	M	Q	R	L	K	E	A	A	E	K	A	K	I	E	L	S	S	A	Q	Q	T	D	V	N	.	.	.	.	.	.	.	.	.	.	.	L	P	Y	I	T	A	D	A	T	G	P	K	H	M	N	I	K	V	T	R	A	K
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence	.																																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.
Template Sequence	.	S	V	R	X	T	E	R	H	L	T	N	D	P	P	T	Q	T	Q	I	D	E	A	V	A	D	V	D	E	H	I	D	E	A	F	R	T	V	D	A	G	K	A	R	T	I	I	G	V	S	G	T	V	T	T	X	T	A	L	A	X	G	L	K	E	Y	D	H	T	V	V	D	G	H	R	L	S	F	E	D
Template Known Secondary structure	.								T			S	S	S																								S		G	G	G		S						S											T	T			S		S		G	G	G	T	T
Template Predicted Secondary structure	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

	305	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	E	S	L	V	E	D	L	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence	A	Y	A	V	D	D	K	F	L	R
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
	263	.	.	.	.	.	.	270	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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