Job Description P0A6Y8 Confidence 31.17% Date Thu Jan 5 11:04:15 GMT 2012 Rank 204 Aligned Residues 72 % Identity 15% Template c2pfuA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:biopolymer transport exbd protein; PDBTitle: nmr strcuture determination of the periplasmic domain of exbd from2 e.coli Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	D	A	W	V	E	V	K	G	Q	K	M	A	P	P	Q	I	S	A	E	V	L	K	K	M	K	K	T	A	E	D	Y	L	G	E	P	V	T	E	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R	I	A	G	L	E	V	K	R	I	I	N	E	P	T	A	A	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		K	A	D	N	S	M	F	I	G	N	D	P	V	T	D	E	T	M	I	T	A	L	.	.	.	.	.	.	.	N	A	L	T	E	G	K	K	D	T	T	I	F	F	R	A	D	K	T	V	D	Y	E	T	L	M	K	V	M	D	T	L	H	Q	A	G	Y	L	K	I	G	L	V	G	E	E	T	A	K	A
Template Known Secondary structure			T	T	T					T	T					S	S	S						.	.	.	.	.	.	.				S	S	S			S	S								T	T																T								T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions