Job Description P0A6Y8 Confidence 98.72% Date Thu Jan 5 11:04:15 GMT 2012 Rank 54 Aligned Residues 193 % Identity 21% Template c2p9kB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-like protein 2; PDBTitle: crystal structure of bovine arp2/3 complex co-crystallized2 with atp and crosslinked with glutaraldehyde Resolution 2.59 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	E	V	K	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L	D	K	G	T	G	N	R	T	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	I	E	I	D	E	V	D	G	E	K	T	F	E	V	L	A	T	N	G	D	T	H	L	G	G	E	D	F	D	S	R	L	I	N	Y	L
Query Conservation
Alig confidence																							.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Sequence		P	M	N	P	T	K	N	R	A	I	Q	A	V	L	T	L	Y	A	Q	G	L	.	.	.	.	.	.	L	T	G	V	V	V	D	S	G	D	G	V	T	H	I	C	P	V	Y	E	G	F	S	L	P	H	L	T	R	R	L	.	.	.	.	.	.	.	D	I	A	G	R	D	I	T	R	Y	L	I	K	L	L
Template Known Secondary structure		T	T			T	T	T			B									T	T		.	.	.	.	.	.	S	S								S	S									T	T				S	T	T					.	.	.	.	.	.	.	S		S
Template Predicted Secondary structure																							.	.	.	.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.										.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		V	E	E	F	K	K	D	Q	G	I	D	L	R	N	D	P	L	A	M	Q	R	L	K	E	A	.	.	.	.	.	.	.	.	.	A	E	K	A	K	I	E	L	S	S	A	Q	Q	T	D	V	N	L	P	Y	I	T	A	D	A	T	G	P	K	H	M	N	I	K	V	T	R	A	K	L	E	S	L	V	E	D
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	L	R	G	Y	A	F	N	H	S	A	D	F	E	T	V	R	M	I	K	E	K	L	C	Y	V	G	Y	N	I	E	Q	E	Q	K	L	A	L	E	T	T	V	L	V	E	S	Y	T	L	P	.	.	.	.	.	.	.	.	.	.	D	G	R	I	I	K	V	G	G	E	R	F	E	A	P	E	A
Template Known Secondary structure			.	.	.		T	T					T	T	T	T																S	S												S	T	T							T	.	.	.	.	.	.	.	.	.	.	T	S							T					T	G	G	G
Template Predicted Secondary structure			.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.											.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		312	.	.	.										.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.																				.	.	360	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	N	R	.	.	.	.	.	.	.	.	.	S	I	E	P	L	K	V	A	L	Q	D	A	G	L	S	V	S	D	.	.	I	D	D	V	I	L	V	G	G	Q	T	R	M	P	M	V	Q	K	K	V	A	E	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	E	P
Query Conservation						.	.	.	.	.	.	.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	Q	P	H	L	I	N	V	E	G	V	G	V	A	E	L	L	F	N	T	I	Q	A	A	D	I	D	T	R	S	E	F	Y	K	H	I	V	L	S	G	G	S	T	M	Y	P	G	L	P	S	R	L	E	R	E	L	K	Q	L	Y	L	E	R	V	L	K	G	D	V	E	K	L	S	K	F	K	I	R	I
Template Known Secondary structure		G	T		G	G	G	G	T			S													T	S		T	T	T						T	T					S	G	G	G		S	T	T																	T	S	T	T		T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	D	V	N	P	D	E	A	V	A	I	G	A	A	V	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	P	P	R	R	K	H	M	V	F	L	G	G	A	V	L	A
Template Known Secondary structure					T	T	G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions