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Job DescriptionP0A6Y8
Confidence100.00%DateThu Jan 5 11:04:15 GMT 2012
Rank1Aligned Residues600
% Identity100%Templatec2khoA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:heat shock protein 70; PDBTitle: nmr-rdc / xray structure of e. coli hsp70 (dnak) chaperone2 (1-605) complexed with adp and substrate
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQ
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Template Sequence  IIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQ
Template Known Secondary structure 


SSTT


TTS
SS

TTS
STTTTT
GGG
GGGTTT
BSSSTT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  RDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGL
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Template Sequence  RDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGL
Template Known Secondary structure 
SS

TTSBTT

S



TT

TTT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE
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Template Sequence  EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEE
Template Known Secondary structure  TTTTSSSS
SS

TTTS
SS
SGGGT
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVA
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Template Conservation                    
   

  
  

        
                


   
         
   
   
Template Sequence  FKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVA
Template Known Secondary structure  S

STT
TTSSSTTTT

STTGGGTS
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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  LQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIET
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Template Sequence  LQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIET
Template Known Secondary structure  TTT

TTT
SSGGGGSSS

B
SS
TTTTTTTTS





SB




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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   404.....410.........420.........430.........440.........450.........460.........470.........480...
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Query Sequence  MGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGI
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Template Conservation         
       
                  
               
    
            
 
         
Template Sequence  MGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGI
Template Known Secondary structure  TTT
TTB
SS

SSTT

SS
SBGGGS


S

TT
S

TTS
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   404.....410.........420.........430.........440.........450.........460.........470.........480...
 
   484.....490.........500.........510.........520.........530.........540.........550.........560...
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Query Sequence  LHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKT
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Template Conservation    
                     
   
                        
 

  
      
             
Template Sequence  LHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKT
Template Known Secondary structure  TTT


TTSS

SGGGS
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   484.....490.........500.........510.........520.........530.........540.........550.........560...
 
   564.....570.........580.........590.........600...
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Query Sequence  AIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQ
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Template Conservation   
   
      
              
      
     
Template Sequence  AIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQ
Template Known Secondary structure  TTSS
TT

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   564.....570.........580.........590.........600...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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