Job Description P0A6Y8 Confidence 95.80% Date Thu Jan 5 11:04:15 GMT 2012 Rank 99 Aligned Residues 281 % Identity 15% Template c2ch5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:nagk protein; PDBTitle: crystal structure of human n-acetylglucosamine kinase in2 complex with n-acetylglucosamine Resolution 1.9 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		M	G	K	.	I	I	G	I	D	L	G	T	T	N	S	C	V	A	I	M	D	G	T	T	P	R	V	L	E	N	A	E	G	D	R	T	T	P	S	I	I	A	Y	T	Q	D	G	E	T	L	V	G	Q	P	A	K	R	Q	A	V	T	N	P	Q	N	T	L	F	A	I	K	R	L	I	G	R	R	F	Q	D
Query Conservation					.
Alig confidence					.																					.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	A	I	Y	G	G	V	E	G	G	G	T	R	S	E	V	L	L	V	S	E	D	G	.	.	.	.	.	.	.	.	.	.	.	K	I	L	A	E	A	D	G	L	S	T	N	H	W	L	I	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S										T	T									T	T	S	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.												.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	V	Q	R	D	V	S	I	M	P	F	K	I	I	A	A	D	N	G	D	A	W	V	E	V	K	G	Q	K	M	A	P	P	Q	I	S	A	E	V	L	K	K	M	K	K	T	A	E	D	Y	L	G	E	P	V	T	E	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	C	V	E	R	I	N	E	M	V	N	R	A	K	R	K	A	G	V	D	P	L	V	P	L	R	S	L	G	L	S	L	S	G	G	D	Q	E	D	A	G	R	I	L	I	E	E	L	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T			T	T			B	S							T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																	44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		I	A	G	L	E	.	.	.	V	K	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L	D	K	G	T	G	N	R	T	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	I	E	I	D	E	V	D	G	E	K	T	F	E	V	L	A	T	N	G	D	T	H	L	G	G	E	D	F	D	S	R	L
Query Conservation							.	.	.
Alig confidence							.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		D	R	F	P	Y	L	S	E	S	Y	L	I	T	T	D	A	A	G	S	I	A	T	A	T	P	D	G	G	.	.	.	.	.	.	.	.	V	V	L	I	S	G	T	G	S	N	C	R	L	I	N	P	D	G	S	E	S	G	C	G	G	W	G	H	M	M	G	D	E	G	S	A	Y	W	I	A	H	Q	A	V
Template Known Secondary structure					T	T	S	B	S																	S	S			.	.	.	.	.	.	.	.						S	S	S								T	T	S										T	T	T			T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.																											.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	Y	L	V	E	E	F	K	K	D	Q	G	I	D	L	R	N	D	P	L	A	M	Q	R	L	K	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	K	A	K	I	E	L	S	S	A	Q	Q	T	D	V	N	L	P	Y	I	T	A	D	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	F	D	S	I	D	N	L	E	A	A	.	.	.	P	H	D	I	G	Y	V	K	Q	A	M	F	H	Y	F	Q	V	P	D	R	L	G	I	L	T	H	L	Y	R	D	F	D	K	C	R	F	A	G	F	C	R	K	I	A	E	G	A	Q	Q	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	S	S			.	.	.	S	S														T		S	S									T	T	T								T	T										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.						.	.	.	350	.	.	.	.	.	.	.	.	.		360	.
Predicted Secondary structure																																										.	.	.																	.	.	.	.	.														.
Query SS confidence																																										.	.	.																	.	.	.	.	.														.
Query Sequence		T	G	P	K	H	M	N	I	K	V	T	R	A	K	L	E	S	L	V	E	D	L	V	N	R	S	I	E	P	L	K	V	A	L	Q	D	A	G	L	S	.	.	.	V	S	D	I	D	D	V	I	L	V	G	G	Q	T	R	M	.	.	.	.	.	P	M	V	Q	K	K	V	A	E	F	F	G	K	.	E	P
Query Conservation																																										.	.	.																	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																	.	.	.	.	.														.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	R	Y	I	F	R	K	A	G	E	M	L	G	R	H	I	V	A	V	L	P	E	I	D	P	V	L	F	Q	G	K	I	G	L	P	I	L	C	V	G	S	V	W	K	S	W	E	L	L	K	E	G	F	L	L	A	L	T	Q	G	R	E	I	F	S	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																						G	G	G	S		G	G	G	G		S	S	S								S	G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	D	V	N	P	D	E	A	V	A	I	G	A	A	V	Q	G	G	V	L	T	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	L	M	K	L	R	H	S	S	A	L	G	G	A	S	L	G	A	R	H	I	G	H
Template Known Secondary structure								S	S		T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions