 |
Job Description | P0A6Y8 | Confidence | 29.12% | Date | Thu Jan 5 11:04:15 GMT 2012 |
Rank | 213 | Aligned Residues | 67 |
% Identity | 13% | Template | c2c7yB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:3-ketoacyl-coa thiolase 2; |
PDBTitle: plant enzyme
|
Resolution | 2.10 Å |
|
 |
  |   |
316 | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | |
|
|
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | |
|
|
360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | E | P | L | K | V | A | L | Q | D | A | G | L | S | V | S | D | I | D | D | V | I | L | . |
. |
. |
V | G | G | Q | T | R | M | P | M | V | Q | K | K | V | A | E | F | F | G | K | . |
. |
. |
E | P | R | K | D | V | N | P | D | E | A | V | A | I | G | A | A | V | Q | G | G | V | L |
Query Conservation |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
| . | . | . |
|
|
|   |
|
|
|
|   |
|   |   |   |
|   |   |   |
|   |   | . | . | . |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|
|   |
|
|
|
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
L | A | P | V | L | R | A | L | I | E | K | T | N | L | N | P | S | E | V | G | D | I | V | V | G | T | V | L | A | P | G | S | Q | R | A | S | E | C | R | M | A | A | F | Y | A | G | F | P | E | T | V | A | V | R | T | V | N | R | Q | C | S | S | G | L | Q | A | V | A | D | V | A | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
|
|
|  |  |  |  |
|
| S | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | S |
|  |  |  |
|
|
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|