Job Description P0A6Y8 Confidence 99.97% Date Thu Jan 5 11:04:15 GMT 2012 Rank 18 Aligned Residues 319 % Identity 17% Template c1o1f4_ PDB info PDB header:contractile protein Chain: 4: PDB Molecule:skeletal muscle actin; PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle Resolution 70.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	I	G	I	D	L	G	T	T	N	S	C	V	A	I	M	D	G	T	T	P	R	V	L	E	N	A	E	G	D	R	T	T	P	S	I	I	A	Y	T	Q	D	G	E	T	L	V	G	Q	P	A	K	R	Q	A	V	T	N	P	Q	N	T	L	F	A	I	K	R	L	I	G	R	R	F	Q	D	E	E
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	A	L	V	C	D	N	G	S	G	L	V	K	A	G	F	A	G	D	D	A	P	R	A	V	.	.	.	.	.	.	.	.	F	P	S	I	V	G	R	P	R	H	Q	G	V	M	V	G	M	G	Q	K	D	S	Y	V	G	D	E	A	Q	S	K	R	G	I	L	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T								S	S							T	T		S	S		S			.	.	.	.	.	.	.	.									S	S					T	T					S				T						T	G	G	G		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		V	Q	R	D	V	S	I	M	P	F	K	I	I	A	A	D	N	G	D	A	W	V	E	V	K	G	Q	K	M	A	P	P	Q	I	S	A	E	V	L	K	K	M	K	K	T	A	E	D	Y	L	G	E	P	V	T	E	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	.	A	G	R	I
Query Conservation																																																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.																										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	K	Y	P	I	E	H	G	I	I	T	N	W	D	D	M	E	K	I	W	H	H	T	F	Y	N	E	L	R	V	.	A	P	E	E	H	P	T	L	L	T	E	A	P	L	N	P	K	A	N	R	E	K	M	T	Q	I	M	F	E	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S			T	T																		T	T	T			.		G	G	G	S								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template SS confidence
																				66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	E	V	K	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L	D	K	G	T	G	N	R	T	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	I	E	I	D	E	V	D	G	E	K	T	F	E	V	L	A	T	N	G	D	T	H	L	G	G	E	D	F	D	S	R	L	I	N	Y	L
Query Conservation
Alig confidence																							.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		F	N	V	P	A	M	Y	V	A	I	Q	A	V	L	S	L	Y	A	S	G	R	.	.	.	.	.	.	T	T	G	I	V	L	D	S	G	D	G	V	T	H	N	V	P	I	Y	E	G	.	.	.	.	.	.	.	Y	A	L	P	H	A	I	M	R	L	D	L	A	G	R	D	L	T	D	Y	L	M	K	I	L
Template Known Secondary structure		T			S															T	S		.	.	.	.	.	.	S	S								S	S									T	T	.	.	.	.	.	.	.				G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.										.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		V	E	E	F	K	K	D	Q	G	I	D	L	R	N	D	P	L	A	M	Q	R	L	K	E	A	.	.	.	.	.	.	.	.	.	A	E	K	A	K	I	E	L	S	S	A	Q	Q	T	D	V	N	L	P	Y	I	T	A	D	A	T	G	P	K	H	M	N	I	K	V	T	R	A	K	L	E	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence											.	.	.														.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation											.	.	.																																										.	.	.	.	.	.	.	.	.
Template Sequence		T	E	R	G	Y	S	F	V	T	.	.	.	T	A	E	R	E	I	V	R	D	I	K	E	K	L	C	Y	V	A	L	D	F	E	N	E	M	A	T	A	A	S	S	S	S	L	E	K	S	Y	E	L	P	.	.	.	.	.	.	.	.	.	D	G	Q	V	I	T	I	G	N	E	R	F	R	C	P	E	T	L
Template Known Secondary structure			T	T	T					S	.	.	.																			S	S	S												T	T							S	.	.	.	.	.	.	.	.	.	S	S						S	S					T	T
Template Predicted Secondary structure											.	.	.																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.										.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
					307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.									.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure		.	.	.																									.	.																													.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																									.	.																													.	.	.	.	.	.	.	.
Query Sequence		.	.	.	S	L	V	E	D	L	V	N	R	S	I	E	P	L	K	V	A	L	Q	D	A	G	L	S	.	.	V	S	D	I	D	D	V	I	L	V	G	G	Q	T	R	M	P	M	V	Q	K	K	V	A	E	F	F	G	.	.	.	.	.	.	.	.	K	E	P	R	K	D	V	N	P	D	E	A	V	A	I
Query Conservation		.	.	.																									.	.																													.	.	.	.	.	.	.	.
Alig confidence		.	.	.																									.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	P	S	F	I	G	M	E	S	A	G	I	H	E	T	T	Y	N	S	I	M	K	C	D	I	D	I	R	K	D	L	Y	A	N	N	V	M	S	G	G	T	T	M	Y	P	G	I	A	D	R	M	Q	K	E	I	T	A	L	A	P	S	T	M	K	I	K	I	I	A	P	P	E	R	K	Y	S	V	W	I
Template Known Secondary structure				G	G	G	G	T			S												T	T	S		T	T	T						T						S	G	G	G	G	S	T	T											T	T	S		T	T	S								T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		374	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	V	Q	G	G	V	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	S	I	L	A	S	L	S	T
Template Known Secondary structure									S	T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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