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Job DescriptionP0A6Y8
Confidence97.70%DateThu Jan 5 11:04:15 GMT 2012
Rank75Aligned Residues182
% Identity26%Templatec1nbwA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycerol dehydratase reactivase alpha subunit; PDBTitle: glycerol dehydratase reactivase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  EPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGI
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Template Sequence  EANMAIAGALTTPGCAAP. LAILDLGAGSTDAAIV. . . . . NAEGQITAVHLAG. . . . AGNMVSLLIKTELGLEDL. . . . .
Template Known Secondary structure  TTSTT

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   393......400.........410 .........420...... ...430......... 440.........450.......
 
   251........260.........270.. .......280.........290.........300.........310
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Query Sequence  DLRNDPLAMQRLKEAAEKAKIE. . . . . . . . . . . . . . . . . . . . LSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVE
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Template Sequence  . . . . . . . . . . . . . SLAEAIKKYPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPIDNASPLEKIRLVRR
Template Known Secondary structure  .............S

SSSTTS

SS


GGGTT
TT

SS
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   458.460.........470.........480.........490.........500.........510.........520....
 
   311........ 320....... ..330.........340.........350....... .. 360.........370.........
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Query Sequence  DLVNRSIEP. LKVALQDA. . GLSVSDIDDVILVGGQTRMPMVQKKVAEFF. . . . . . . GK. EPRKDVNPDEAVAIGAAVQG
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Template Sequence  QAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAG
Template Known Secondary structure  SSSSTT

STT

SGGGGSSSTTT


GGGTS
S

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   525....530.........540.........550.........560.........570.........580.........590.........600....
 
   380
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Query Sequence  G
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Template Conservation   
Template Sequence  Q
Template Known Secondary structure 
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Template SS confidence 
   605
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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