Job Description P0A6Y8 Confidence 100.00% Date Thu Jan 5 11:04:15 GMT 2012 Rank 8 Aligned Residues 317 % Identity 25% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		M	G	K	I	I	G	I	D	L	G	T	T	N	S	C	V	A	I	M	D	G	T	T	P	R	V	L	E	N	A	E	G	D	R	T	T	P	S	I	I	A	Y	T	Q	D	G	E	.	.	T	L	V	G	Q	P	A	K	R	Q	A	V	T	N	P	Q	N	T	L	F	A	I	K	R	L	I	G	R	R	F	Q
Query Conservation																																																	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.															.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	K	D	I	G	I	D	L	G	T	A	N	T	L	V	F	L	R	G	K	G	I	V	.	.	.	.	.	.	.	.	.	V	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S									S	S							T	T	T				.	.	.	.	.	.	.	.	.					S						T	T	T							S					T	T	T	T	S			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	E	V	Q	R	D	V	S	I	M	P	F	K	I	I	A	A	D	N	G	D	A	W	V	E	V	K	G	Q	K	M	A	P	P	Q	I	S	A	E	V	L	K	K	M	K	K	T	A	E	D	Y	L	G	E	P	V	T	E	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	I	R	P	M	R	D	G	V	I	A	D	Y	T	V	A	L	V	M	L	R	Y	F	I	N	K	A	K	G	G	M	N	L	F	K	P	R	V	V	I	G	V	P	I	G	I	T	D	V	E	R	R	A	I	L	D	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T			S	S																	T	S			S	S										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	A	G	L	E	V	K	R	I	I	N	E	P	T	A	A	A	L	A	Y	G	L	D	K	G	T	G	N	R	T	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	I	E	I	D	E	V	D	G	E	K	T	F	E	V	L	A	T	N	G	D	T	H	L	G	G	E	D	F	D	S	R	L	I	N
Query Conservation
Alig confidence																														.																						.	.	.	.	.	.	.	.	.
Template Conservation																														.																						.	.	.	.	.	.	.	.	.
Template Sequence		L	E	A	G	A	S	K	V	F	L	I	E	E	P	M	A	A	A	I	G	S	N	L	N	V	E	E	P	.	S	G	N	M	V	V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	G	.	.	.	.	.	.	.	.	.	S	I	V	T	W	E	S	I	R	I	A	G	D	E	M	D	E	A	I	V	Q
Template Known Secondary structure			T	T	T		S														T	T	T			S	S	S	S	.	S									S	S									T	T	.	.	.	.	.	.	.	.	.									S		S
Template Predicted Secondary structure																														.																						.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.										.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	V	E	E	F	K	K	D	Q	G	I	D	L	R	N	D	P	L	A	M	Q	R	L	K	E	A	A	E	K	A	K	I	E	L	S	S	A	Q	Q	T	D	V	N	L	P	Y	I	T	A	D	A	T	G	P	K	H	M	N	I	K	V	T	R	A	K	L	E	S	L	V	E	D	L	V	N	R	S	I	E
Query Conservation
Alig confidence													.	.	.																																.	.	.	.	.	.
Template Conservation													.	.	.																																.	.	.	.	.	.
Template Sequence		Y	V	R	E	T	Y	R	V	A	I	G	.	.	.	E	R	T	A	E	R	V	K	I	E	I	G	N	V	F	P	S	K	E	N	D	E	L	E	T	T	V	S	G	I	D	.	.	.	.	.	.	L	S	T	G	L	P	R	K	L	T	L	K	G	G	E	V	R	E	A	L	R	S	V	V	V	A	I	V	E
Template Known Secondary structure													.	.	.													B		S							T										.	.	.	.	.	.	T	T	T	T
Template Predicted Secondary structure													.	.	.																																.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		P	L	K	V	A	L	Q	D	A	G	L	S	V	S	D	.	.	.	I	D	D	V	I	L	V	G	G	Q	T	R	M	P	M	V	Q	K	K	V	A	E	F	F	G	K	E	P	R	K	D	V	N	P	D	E	A	V	A	I	G	A	A	V	Q	G
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		S	V	R	T	T	L	E	K	T	P	P	E	L	V	S	D	I	I	E	R	G	I	F	L	T	G	G	G	S	L	L	R	G	L	D	T	L	L	Q	K	E	T	G	I	S	V	I	R	S	E	E	P	L	T	A	V	A	K	G	A	G	M	V	L
Template Known Secondary structure									T	S																	S	G	G	G		S	B	T											S						S	S	S	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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