|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | H | Y | E | N | P | R | N | V | G | S | F | D | N | N | D | E | N | V | G | S | G | M | V | G | A | P | A | C | G | D | V | M | K | L | Q | I | K | V | N | D | E | G | I | I | E | D | A | R | F | K | T | Y | G | C | G | S | A | I | A | S | S | S | L | V | T | E | W | V | K | G | K | S | L | D | E | A | Q | A | I |
Query Conservation |   |
  |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|
|
|   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|
|
|
|   |
|
|   |   |
|
Template Sequence |   |
S | S | G | E | N | P | R | N | V | G | S | L | D | K | T | S | K | N | V | G | T | G | L | V | G | A | P | A | C | G | D | V | M | K | L | Q | I | Q | V | D | E | K | G | K | I | V | D | A | R | F | K | T | F | G | C | G | S | A | I | A | S | S | S | L | A | T | E | W | V | K | G | K | T | V | E | E | A | L | T | I |
Template Known Secondary structure |   |
|
|
| S |
|
| S | S |
|
|
|
|
| T | T |
| S | S |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |
| S | S | S | B |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | B |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | T | D | I | A | E | E | L | E | L | P | P | V | K | I | H | C | S | I | L | A | E | D | A | I | K | A | A | I | A | D | Y | K | S | K | R | E | A | K |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
K | N | T | D | I | A | K | E | L | C | L | P | P | V | K | L | H | C | S | M | L | A | E | D | A | I | K | A | A | L | A | D | Y | K | L | K | Q | E | S | K |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |