Job Description P0ACD4 Confidence 38.29% Date Thu Jan 5 11:17:57 GMT 2012 Rank 18 Aligned Residues 55 % Identity 18% Template c3jywN_ PDB info PDB header:ribosome Chain: N: PDB Molecule:60s ribosomal protein l17(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution Resolution 8.90 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	L	V	T	E	W	V	K	G	K	S	L	D	E	A	Q	A	I	K	N	T	D	I	A	E	E	L	E	L	P	P	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	C	S	I	L	A	E	D	A	I	K	A	A	I	A	D	Y	K	S	K
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	E	T	A	Q	A	I	N	G	W	E	L	T	K	A	Q	K	Y	L	E	Q	V	L	D	H	Q	R	A	I	P	F	R	R	F	N	S	S	I	G	R	T	A	Q	G	K	E	F	G	V	T	K	A	R	W	P	A	K	S	V	K	F	V	Q	G	L	L	Q	N	A	A	A	N	A	E	A	K
Template Known Secondary structure								T	T	S	S	S	B													S	S	S			B				S			S	S			B		G	G	G		S	S	S			B		B
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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