Job Description P0ACD4 Confidence 32.96% Date Thu Jan 5 11:17:57 GMT 2012 Rank 25 Aligned Residues 55 % Identity 18% Template c3iz5V_ PDB info PDB header:ribosome Chain: V: PDB Molecule:60s ribosomal protein l17 (l22p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	L	V	T	E	W	V	K	G	K	S	L	D	E	A	Q	A	I	K	N	T	D	I	A	E	E	L	E	L	P	P	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	C	S	I	L	A	E	D	A	I	K	A	A	I	A	D	Y	K	S	K
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	E	T	A	F	A	I	R	K	L	P	L	G	K	A	K	R	Y	L	E	D	V	I	A	H	K	Q	A	I	P	F	R	R	Y	C	G	G	V	G	R	T	A	Q	A	K	S	R	H	S	N	G	Q	G	R	W	P	A	K	S	A	R	F	I	L	D	L	L	K	N	A	E	S	N	A	E	V	K
Template Known Secondary structure									S		S			S													T	S	S					S	S			S	S					S			B	T	T	B	S		S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions