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Job Description | P0ACD4 | Confidence | 18.05% | Date | Thu Jan 5 11:17:57 GMT 2012 |
Rank | 38 | Aligned Residues | 86 |
% Identity | 16% | Template | c3hrdC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:nicotinate dehydrogenase fad-subunit; |
PDBTitle: crystal structure of nicotinate dehydrogenase
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Resolution | 2.20 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | K | L | Q | I | K | V | N | D | E | G | I | I | E | D | A | R | F | K | T | Y | G | C | G | S | A | I | A | S | S | S | L | V | T | E | W | V | K | G | K | S | L | . |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | G | M | A | V | K | V | D | D | A | G | V | C | T | W | A | S | M | R | G | G | C | I | G | R | Y | P | L | H | F | K | Q | A | E | E | M | L | V | G | A | P | L | T | M | E | T | M | E | A | T | L | P | I | L | H | D | T | V | Y | D | M | A | R | A | R | P | S | V | L | Y | K | K | E | S | V | Q | G | V | F | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
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116 | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | A | I | A | D | Y | K | S | K | R | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | L | F | V | D | I | L | D | Q | L | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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281 | . | . | . | . | . | . | . | . | 290 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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