Job Description P0ACD4 Confidence 56.03% Date Thu Jan 5 11:17:57 GMT 2012 Rank 12 Aligned Residues 55 % Identity 15% Template c2zkrr_ PDB info PDB header:ribosomal protein/rna Chain: R: PDB Molecule:rna expansion segment es39 part i; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	L	V	T	E	W	V	K	G	K	S	L	D	E	A	Q	A	I	K	N	T	D	I	A	E	E	L	E	L	P	P	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	C	S	I	L	A	E	D	A	I	K	A	A	I	A	D	Y	K	S	K
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	E	T	A	Q	A	I	K	G	M	H	I	R	K	A	T	K	Y	L	K	D	V	T	L	Q	K	Q	C	V	P	F	R	R	Y	N	G	G	V	G	R	C	A	Q	A	K	Q	W	G	W	T	Q	G	R	W	P	K	K	S	A	E	F	L	L	H	M	L	K	N	A	E	S	N	A	E	L	K
Template Known Secondary structure										T	T	S	B														T	S	S					S	S	S		T	T			B			S	T	T	S		S		S	B
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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