Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACD4
Confidence18.21%DateThu Jan 5 11:17:57 GMT 2012
Rank36Aligned Residues25
% Identity20%Templatec2p1nD_
PDB info PDB header:signaling proteinChain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80........
Predicted Secondary structure 



Query SS confidence 
























Query Sequence  GSAIASSSLVTEWVKGKSLDEAQAI
Query Conservation   
  



     
 



 

  
Alig confidence 
























Template Conservation   



 
  

  
 


 



  
Template Sequence  NLLDLTCQTVADMIKGKTPEEIRTT
Template Known Secondary structure  TT

Template Predicted Secondary structure 



Template SS confidence 
























   112.......120.........130......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions