Return to main results Retrieve Phyre Job Id

Job DescriptionP08194
Confidence100.00%DateThu Jan 5 11:00:52 GMT 2012
Rank1Aligned Residues431
% Identity97%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMG
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Template Conservation    
 
               
  
 
                      
     
 
    
 
 
       
     
Template Sequence  FKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMG
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S

TSTTSSTT
SS
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Query Sequence  SVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCA
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Template Sequence  SVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCA
Template Known Secondary structure  S

SSSSTTT
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Query Sequence  HNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQI
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Template Sequence  HNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSC. . . . . . . . . . . . . GLPPIEEYKNDTAKQI
Template Known Secondary structure  TST

STT
T


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T
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Query Sequence  FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT
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Template Conservation                                                                   
 
            
Template Sequence  FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT
Template Known Secondary structure  TSS
BTTBS


TSTT
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Query Sequence  GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV
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Template Conservation                                   
                       
   
         
        
Template Sequence  GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV
Template Known Secondary structure  TTS

TT
TTS
TT
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Query Sequence  GYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE
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Template Conservation 
 
    
                                   
Template Sequence  GYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE
Template Known Secondary structure  SS
SGGGGG
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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