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Job DescriptionP08194
Confidence99.98%DateThu Jan 5 11:00:52 GMT 2012
Rank4Aligned Residues369
% Identity15%Templatec2gfpA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:multidrug resistance protein d; PDBTitle: structure of the multidrug transporter emrd from2 escherichia coli
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  IFLGIFFGYAAYYLVRKNFALAMPYLV. EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVML
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Template Sequence  LLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATL
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Query Sequence  FMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHA
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Template Sequence  VAVT. . . . TSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRAC
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Query Sequence  ALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLL
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Template Sequence  YLFLLVLCAGVTFSMA. . . . . . . . . . . . . . . . . . . . . . RWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIGGLAG
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Query Sequence  RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPT
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Template Sequence  IAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFG. . VMNVW
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Query Sequence  VDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAV
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Template Sequence  TLLVPAALFFFGAGMLFPLATSGAMEPFP. FLAGTAGALVGGLQNIGSGV. LASLSAMLPQTGQGSLGLLMTLMGLLIVL
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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