Job Description P16525 Confidence 1.93% Date Thu Jan 5 11:35:12 GMT 2012 Rank 88 Aligned Residues 94 % Identity 9% Template c3ggzC_ PDB info PDB header:protein transport, endocytosis Chain: C: PDB Molecule:increased sodium tolerance protein 1; PDBTitle: crystal structure of s.cerevisiae ist1 n-terminal domain in2 complex with did2 mim motif Resolution 3.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30												.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.							.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.
Query SS confidence																			.	.	.							.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.
Query Sequence		D	R	L	N	T	T	F	R	Q	M	E	Q	E	L	A	I	F	.	.	.	A	A	H	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	H	K	L	.	.	.	.	.	L	V	A	R	V	F	S	L	P	E	V	K	K	E	D	E	H	N	P	L	N	R	I	E	V	K	Q	H	L	G	N	D	A	Q	S
Query Conservation																			.	.	.							.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.
Alig confidence																			.	.	.							.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.																													.
Template Conservation																																																																											.
Template Sequence		D	I	H	I	E	L	L	E	I	L	E	L	Y	C	E	L	L	L	A	R	V	Q	V	I	N	D	I	S	T	E	E	Q	L	V	K	E	H	M	D	D	G	I	N	E	A	I	R	S	L	I	Y	A	I	L	F	V	D	E	V	K	E	L	S	Q	L	K	D	L	M	A	W	K	I	.	N	V	E	F	V	N
Template Known Secondary structure																					T					S	S			S						T	T	S	S	S	S	S																	T	T	T	T										T	T	S	.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	R	H	F	R	H	L	F	I	Q	Q	Q	S	E	N	R	S	S	K	A	A	V	R	L	P	G	V	L	C	Y	Q	V	D	N	L	S	Q	A	A	L	V	S	H	I	Q	H	I
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Sequence		G	V	I	A	.	.	.	.	.	.	.	.	.	D	H	I	D	V	P	E	K	I	I	K	K	C	S	P	.	.	.	.	.	.	S	V	P	K	E	E	L	V	D	L	Y	L	K	E	I
Template Known Secondary structure					T	.	.	.	.	.	.	.	.	.	T		T	T										S		.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template SS confidence
		143	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions