Job Description P16525 Confidence 2.28% Date Thu Jan 5 11:35:12 GMT 2012 Rank 58 Aligned Residues 69 % Identity 14% Template c2oevA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:programmed cell death 6-interacting protein; PDBTitle: crystal structure of alix/aip1 Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	V	D	N	L	S	Q	A	A	L	V	S	H	I	Q	H	I	N	K	L	K	T	T	F	E	H	I	V	T	V	E	S	E	L	P	T	A	A	R	F	E	W	V	H	R	H	L	P	G	L	I	T	L	N	A	Y	R	T	L	T	V	L	H	D	P	A	T	L	R	F	G	W	A	N
Query Conservation
Alig confidence																											.	.	.	.																										.	.
Template Conservation																											.	.	.	.																										.	.
Template Sequence		Y	P	S	G	G	E	E	Q	A	Q	Y	C	R	A	A	E	E	L	S	K	L	R	R	A	A	.	.	.	.	V	G	R	P	L	D	K	H	E	G	A	L	E	T	L	L	R	Y	Y	D	Q	I	C	S	I	.	.	E	P	K	F	P	F	S	E	N	Q	I	C	L	T	F	T	W	K	D
Template Known Secondary structure					S	S	S	G	G	G	T	T	T	T	T												.	.	.	.		S	S				S	S	S															T	T	.	.	G	G	G	S		S	S		S	S
Template Predicted Secondary structure																											.	.	.	.																										.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions