Job Description P17802 Confidence 100.00% Date Thu Jan 5 11:36:16 GMT 2012 Rank 7 Aligned Residues 210 % Identity 20% Template d2abka_ SCOP info DNA-glycosylase DNA-glycosylase Endonuclease III Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	A	S	Q	F	S	A	Q	V	L	D	W	Y	D	K	Y	G	R	K	T	L	P	W	Q	I	D	K	T	P	Y	K	V	W	L	S	E	V	M	L	Q	Q	T	Q	V	A	T	V	I	P	Y	F	E	R	F	M	A	R	F	P	T	V	T	D	L	A	N	A	P	L	D	E	V	L	H	L	W	T	G	L
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		M	N	K	A	K	R	L	E	I	L	T	R	L	R	E	N	N	P	H	.	P	T	T	E	L	N	F	S	S	P	F	E	L	L	I	A	V	L	L	S	A	Q	A	T	D	V	S	V	N	K	A	T	A	K	L	Y	P	V	A	N	T	P	A	A	M	L	E	L	G	V	E	G	V	K	T	Y	I	K	T	I
Template Known Secondary structure																			S	S	.				S	S			S	S											T	T	T	S													T	T	T			S																	T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		G	Y	Y	A	.	R	A	R	N	L	H	K	A	A	Q	Q	V	A	T	L	H	G	G	K	F	P	E	T	F	E	E	V	A	A	L	P	G	V	G	R	S	T	A	G	A	I	L	S	L	S	L	G	K	H	F	P	I	L	D	G	N	V	K	R	V	L	A	R	C	Y	A	V	S	G	W	P	G	K	K	E
Query Conservation						.
Alig confidence						.																																																																					.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		G	L	Y	N	S	K	A	E	N	I	I	K	T	C	R	I	L	L	E	Q	H	N	G	E	V	P	E	D	R	A	A	L	E	A	L	P	G	V	G	R	K	T	A	N	V	V	L	N	T	A	F	G	W	P	T	I	A	V	D	T	H	I	F	R	V	C	N	R	T	Q	F	A	P	.	.	.	.	.	G	K
Template Known Secondary structure		T	T																			T	T	T	S			S								S	T	T																																		S	S		.	.	.	.	.		S
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	N	K	L	W	S	L	S	E	Q	V	T	P	A	V	G	V	E	R	F	N	Q	A	M	M	D	L	G	A	M	I	C	T	R	S	K	P	K	C	S	L	C	P	L	Q	N	G	C	I	A	A	A	N	N	S	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	E	Q	V	E	E	K	L	L	K	V	V	P	A	E	F	K	V	D	C	H	H	W	L	I	L	H	G	R	Y	T	C	I	A	R	K	P	R	C	G	S	C	I	I	E	D	L	C	E	Y	K	E	K	V	D	I
Template Known Secondary structure		S												S		G	G	G	T	T	T												T	S		S	S	S			G	G	G		T	T	G	G	G				T	T		S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions