Job Description P17802 Confidence 60.76% Date Thu Jan 5 11:36:16 GMT 2012 Rank 169 Aligned Residues 52 % Identity 21% Template c3p5tE_ PDB info PDB header:rna binding protein Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5; PDBTitle: cfim25-cfim68 complex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.											.	.
Query SS confidence																	.											.	.
Query Sequence		L	P	E	R	T	G	Y	F	L	L	L	Q	H	E	D	.	E	V	L	L	A	Q	R	P	P	S	.	.	G	L	W	G	G	L	Y	C	F	P	Q	F	A	D	E	E	S	L	R	Q	W	L	A	Q	R	Q	I
Query Conservation																	.											.	.
Alig confidence																	.											.	.
Template Conservation
Template Sequence		R	R	T	V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	G	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	V
Template Known Secondary structure														T	T										T	T	T					S						T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions