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Job DescriptionP17802
Confidence99.96%DateThu Jan 5 11:36:16 GMT 2012
Rank11Aligned Residues146
% Identity16%Templatec3n0uB_
PDB info PDB header:hydrolase, lyaseChain: B: PDB Molecule:probable n-glycosylase/dna lyase; PDBTitle: crystal structure of tm1821, the 8-oxoguanine dna glycosylase of2 thermotoga maritima
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80. ... .....90..... ....100..
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Query Sequence  TPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLG. . YYA. RARNLHKAAQQ. . . VATLHGG
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Template Sequence  DLFCELSFCVLTANWSAEGGIRAQKEIGKGFVH. . . . . . LPLEELAEKLREVGHRYPQKRAEFIVENRKLLGKLKNLVKG
Template Known Secondary structure  TTS
TT......S
TT
SSGGGTTTS
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   37..40.........50.........60......... 70.........80.........90.........100.........110
 
   103......110.. .......120.........130.........140.........150.........160.........170.........180.
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Query Sequence  KFPETFEEVA. ALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFN
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Template Sequence  DPFQSREFLVRNAKGIGWKEASHFLRNTGVEDLAILDKHVLRLMKRHGLIQEIPKG. . . . . . . . . . . . . . WSKKRYLYVE
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   111........120.........130.........140.........150.........160...... ...170......
 
   182.......190....
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Query Sequence  QAMMDLGAMICTR
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Template Sequence  EILRKVAEAFGES
Template Known Secondary structure  T

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   177..180.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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