Job Description P17802 Confidence 99.96% Date Thu Jan 5 11:36:16 GMT 2012 Rank 10 Aligned Residues 166 % Identity 16% Template c3kntC_ PDB info PDB header:hydrolase, lyase/dna Chain: C: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: crystal structure of methanocaldococcus jannaschii 8-2 oxoguanine glycosylase/lyase in complex with 15mer dna3 containing 8-oxoguanine Resolution 2.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.
Predicted Secondary structure																																																																												.	.				.
Query SS confidence																																																																												.	.				.
Query Sequence		A	Q	V	L	D	W	Y	D	K	Y	G	R	K	T	L	P	W	Q	I	D	K	T	P	Y	K	V	W	L	S	E	V	M	L	Q	Q	T	Q	V	A	T	V	I	P	Y	F	E	R	F	M	A	R	F	P	T	V	T	D	L	A	N	A	P	L	D	E	V	L	H	L	W	T	G	L	G	.	.	Y	Y	A	.
Query Conservation																																																																												.	.				.
Alig confidence												.																																									.	.	.	.	.	.																		.	.				.
Template Conservation												.																																									.	.	.	.	.	.
Template Sequence		K	D	I	I	D	K	R	I	Q	E	.	F	K	S	F	K	N	K	S	N	E	E	W	F	K	E	L	C	F	C	I	L	T	A	N	F	T	A	E	G	G	I	R	I	Q	K	E	I	G	D	G	.	.	.	.	.	.	F	L	T	L	P	R	E	E	L	E	E	K	L	K	N	L	G	H	R	F	Y	R	K
Template Known Secondary structure												.			G	G	G	G															T	S	T	T	S													T	T		.	.	.	.	.	.				S												T	T		T	T
Template Predicted Secondary structure												.																																									.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		R	A	R	N	L	H	K	A	A	Q	Q	V	A	T	L	H	G	G	K	F	P	E	T	F	E	E	.	.	.	.	.	V	A	A	L	P	G	V	G	R	S	T	A	G	A	I	L	S	L	S	L	G	K	H	F	P	I	L	D	G	N	V	K	R	V	L	A	R	C	Y	A	V	S	G	W	P	G	K	K	E
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		R	A	E	Y	I	V	L	A	R	R	F	K	N	I	K	D	I	V	E	S	F	E	N	E	K	V	A	R	E	F	L	V	R	N	I	K	G	I	G	Y	Q	E	A	S	H	F	L	R	N	V	G	Y	D	D	V	A	I	I	D	R	H	I	L	R	E	L	Y	E	N	N	Y	I	D	E	I	P	.	.	.	.
Template Known Secondary structure									G	G	G	G										S	S	S												S	T	T													T	T			S															T	T	S	S	S	S			.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	N	K	L	W	S	L	S	E	Q	V	T	P	A	V	G	V	E	R	F	N	Q	A	M	M	D	L	G	A	M	I	C	T	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	K	T	L	S	R	R	K	Y	L	E	I	E	N	I	L	R	D	I	G	E	E	V	N	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	S																					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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