Job Description P17802 Confidence 99.40% Date Thu Jan 5 11:36:16 GMT 2012 Rank 56 Aligned Residues 122 % Identity 20% Template c3gz8C_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:mutt/nudix family protein; PDBTitle: cocrystal structure of nudix domain of shewanella oneidensis2 nrtr complexed with adp ribose Resolution 2.43 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.				.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																			.	.	.														.	.	.					.	.	.					.	.
Query SS confidence																			.	.	.														.	.	.					.	.	.					.	.
Query Sequence		K	K	P	K	Q	T	L	P	E	R	T	G	Y	F	L	L	L	.	.	.	Q	H	E	D	E	V	L	L	A	Q	R	P	P	.	.	.	S	G	L	W	.	.	.	G	G	L	Y	.	.	C	F	P	Q	F	A	D	E	E	S	L	R	Q	W	L	A	Q	R	Q	I	A	A	D	N	L	T	Q	L	T	A	F
Query Conservation																			.	.	.														.	.	.					.	.	.					.	.
Alig confidence																			.	.	.														.	.	.					.	.	.					.	.
Template Conservation
Template Sequence		D	P	K	A	F	K	A	Q	L	L	T	V	D	A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	F	L	G	L	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V
Template Known Secondary structure			G	G	G	S																T	T										S	S	S	S	S	T	T											T	T	T		S	S																		S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		291	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure							.	.	.	.																							.
Query SS confidence							.	.	.	.																							.
Query Sequence		R	H	T	F	S	.	.	.	.	H	F	H	L	D	I	V	P	M	W	L	P	V	S	S	F	T	G	C	M	D	E	.	G	N	A	L	W	Y	N	L	A	Q	P	P	S	V	G	L	A	A	P	V	E	R	L	L	Q	Q
Query Conservation							.	.	.	.																							.
Alig confidence							.	.	.	.																							.
Template Conservation
Template Sequence		G	N	N	S	R	D	A	R	G	W	S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	F	D	H	L	Q	L	I	E	Q
Template Known Secondary structure				S	S	S		T	T	S	S																			S	T	T													T	T	S		B	S	T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions