 |
Job Description | P17802 | Confidence | 22.50% | Date | Thu Jan 5 11:36:16 GMT 2012 |
Rank | 226 | Aligned Residues | 27 |
% Identity | 30% | Template | c3bbnM_ |
PDB info |
PDB header:ribosome | Chain: M: PDB Molecule:ribosomal protein s13; |
PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.
|
Resolution | 9.40 Å |
|
  |   |
100 | . | . | . | . | . | . | . | |
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | G | K | F | P | E | T | . |
. |
. |
F | E | E | V | A | A | L | P | G | V | G | R | S | T | A | G | A | I | L |
Query Conservation |   |
  |   |
|   |   |
|   |   | . | . | . |   |   |   |
|   |   |
|
|
|
|
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |
Template Sequence |   |
G | G | V | E | I | P | N | H | K | R | V | E | Y | S | L | Q | Y | I | H | G | I | G | R | S | R | S | R | Q | I | L |
Template Known Secondary structure |   |
S | S | S |
|
|
|
| S | S | B | T | T | T | G | G | G | G | S | T | T |
|
| S | S | T | T | T | G | G | G |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|