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Job DescriptionP17802
Confidence53.61%DateThu Jan 5 11:36:16 GMT 2012
Rank180Aligned Residues91
% Identity18%Templatec2zj2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative ski2-type helicase; PDBTitle: archaeal dna helicase hjm apo state in form 1
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
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Query Sequence  YKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEE
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Template Sequence  KTALVLLAWINEVPEGEIVEKYSVEPGDIYRIVETAEWLVYSLKEIAKVLGAYEIVDYLETLRVRVKYG. . . . IREELIP
Template Known Secondary structure  TT

T

TTTT
GGGT....

GGGSG
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   572.......580.........590.........600.........610.........620.........630.........640 .......
 
   111........120.....
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Query Sequence  VAALPGVGRSTAGAI
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Template Sequence  LMQLPLVGRRRARAL
Template Known Secondary structure  GG
SSS

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   648.650.........660..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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