Job Description P17802 Confidence 99.92% Date Thu Jan 5 11:36:16 GMT 2012 Rank 18 Aligned Residues 174 % Identity 20% Template c2yg8B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dna-3-methyladenine glycosidase ii, putative; PDBTitle: structure of an unusual 3-methyladenine dna glycosylase ii (2 alka) from deinococcus radiodurans Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																						.	.																										.
Query SS confidence																																																						.	.																										.
Query Sequence		A	Q	V	L	D	W	Y	D	K	Y	G	R	K	T	L	P	W	Q	I	D	K	T	P	Y	K	V	W	L	S	E	V	M	L	Q	Q	T	Q	V	A	T	V	I	P	Y	F	E	R	F	M	A	R	F	.	.	P	T	V	T	D	L	A	N	A	P	L	D	E	V	L	H	L	W	T	G	L	G	Y	Y	A	.
Query Conservation																																																						.	.																										.
Alig confidence														.																																								.	.															.	.	.	.								.
Template Conservation														.																																																								.	.	.	.
Template Sequence		P	V	L	A	Q	V	T	S	L	C	G	E	.	L	P	V	L	A	P	T	P	D	P	F	G	R	L	V	R	S	V	A	G	Q	Q	L	S	V	K	A	A	Q	A	I	Y	G	R	L	E	G	L	P	G	G	V	V	P	A	A	L	L	K	V	S	G	D	D	L	.	.	.	.	R	G	V	G	L	S	W	A
Template Known Secondary structure														.								S													T	T	S														T	S	T	T		S						T	T	S						.	.	.	.			T	T
Template Predicted Secondary structure														.																																																								.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																																			.					.
Query SS confidence																	.	.	.	.	.	.	.																																			.					.
Query Sequence		R	A	R	N	L	H	K	A	A	Q	Q	V	A	T	L	.	.	.	.	.	.	.	H	G	G	K	F	P	E	T	F	E	E	V	A	A	L	P	G	V	G	R	S	T	A	G	A	I	L	S	L	S	L	G	K	H	.	F	P	I	L	.	D	G	N	V	K	R	V	L	A	R	C	Y	A	V	S	G	W	P
Query Conservation																	.	.	.	.	.	.	.																																			.					.
Alig confidence																	.	.	.	.	.	.	.																																			.					.													.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		K	V	R	T	V	Q	A	A	A	A	A	A	V	S	G	Q	I	D	F	A	H	L	S	G	Q	P	D	E	L	V	I	A	E	L	V	Q	L	P	G	I	G	R	W	T	A	E	X	F	L	L	F	A	L	A	R	P	D	V	F	S	S	G	D	L	A	L	R	Q	G	V	E	R	L	Y	.	.	.	.	.	.
Template Known Secondary structure															T	T	S	S		G	G	G	G	G	G	S											T	S	T	T													T	S			S					T	T												S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	K	E	V	E	N	K	L	W	S	L	S	E	Q	V	T	P	A	V	G	V	E	R	F	N	Q	A	M	M	D	L	G	A	M	I	C	T	R	S	K	P	K
Query Conservation
Alig confidence		.	.	.	.																							.	.
Template Conservation		.	.	.	.																							.	.
Template Sequence		.	.	.	.	P	G	E	D	W	R	D	V	T	A	R	W	A	P	Y	R	S	L	A	S	R	Y	.	.	L	W	A	N	S	A	R	X	Q	A	G	G	A	P	L
Template Known Secondary structure		.	.	.	.	T	T	S								T	T	T	T									.	.										T	T
Template Predicted Secondary structure		.	.	.	.																							.	.
Template SS confidence
						189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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