Job Description P17802 Confidence 98.73% Date Thu Jan 5 11:36:16 GMT 2012 Rank 95 Aligned Residues 120 % Identity 16% Template c2pnyA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2; PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2 Resolution 1.81 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.					.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																														.	.	.	.	.				.	.	.	.													.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																														.	.	.	.	.				.	.	.	.													.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		K	Q	T	L	P	E	R	T	G	Y	F	L	L	L	Q	H	E	D	E	V	L	L	A	Q	R	P	P	S	.	.	.	.	.	G	L	W	.	.	.	.	G	G	L	Y	C	F	P	Q	F	A	D	E	.	.	.	.	.	.	.	.	.	E	S	L	R	Q	W	L	A	Q	R	Q	I	A	A	D	N	.	.	.
Query Conservation																														.	.	.	.	.				.	.	.	.													.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																														.	.	.	.	.				.	.	.	.													.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		E	K	G	L	L	H	R	A	F	S	V	V	L	F	N	T	K	N	R	I	L	I	Q	Q	R	S	D	T	K	V	T	F	P	G	Y	F	T	D	S	C	S	S	H	P	L	Y	N	P	A	E	L	E	E	K	D	A	I	G	V	R	R	A	A	Q	R	R	L	Q	A	E	L	G	I	P	G	E	Q	I	S	P
Template Known Secondary structure		T	T	T													T	T										T	T		S	S	S	T	T		B			S						B	S	S							G	G	G																			T	T	T			G
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
				284	.	.	.	.	.	290	.	.	.	.	.								.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330										.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	L	T	Q	L	T	A	F	R	H	T	F	S	.	.	.	.	.	.	.	H	F	H	L	D	I	V	P	M	W	L	P	V	S	S	F	T	G	C	M	D	E	G	N	A	L	W	Y	N	L	A	Q	P	P	S	.	.	.	.	.	.	.	.	.	V	G	L	A	A	P	V	E	R	L	L	Q	Q	L
Query Conservation		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	I	V	F	M	T	I	Y	H	H	K	A	K	S	D	R	I	W	G	E	H	E	I	C	Y	L	L	L	V	R	K	N	V	T	L	N	P	D	P	S	E	T	K	S	I	L	Y	L	S	Q	E	E	L	W	E	L	L	E	R	E	A	R	G	E	V	K	V	T	P	W	L	R	T	I	A	E	R	F
Template Known Secondary structure		G	G	S												S	S	S	S	B																					T	T	T																						T	S	S		B											T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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