Job Description P17802 Confidence 21.51% Date Thu Jan 5 11:36:16 GMT 2012 Rank 232 Aligned Residues 69 % Identity 22% Template c2pjpA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna Resolution 2.30 Å

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		60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80												.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure											.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	V	T	D	L	A	N	A	.	.	.	P	L	D	E	V	L	H	L	W	T	G	L	.	.	.	.	.	.	.	.	.	.	.	G	Y	Y	A	R	A	R	N	L	H	K	A	A	Q	Q	V	A	T	L	H	G	G	K	F	P	E	T	F	E	E	V	A	A	L	P	G	V	G	R	S	T	A	G	A	I
Query Conservation											.	.	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	W	V	R	D	L	A	K	E	T	G	T	D	E	Q	A	M	R	L	T	L	R	Q	A	A	Q	Q	G	I	I	T	A	I	V	K	D	R	Y	Y	R	N	D	R	I	V	E	F	A	N	M	I	R	D	L	D	Q	E	C	G	S	T	C	A	A	D	F	R	D	R	L	G	V	G	R	K	L	A	I	Q	I
Template Known Secondary structure											T	T																T	T	S						T	T																							S	S											T	S
Template Predicted Secondary structure
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
		126	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		587	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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