Job Description P17802 Confidence 98.51% Date Thu Jan 5 11:36:16 GMT 2012 Rank 98 Aligned Residues 101 % Identity 10% Template c2j8qB_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5; PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion. Resolution 2.3 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																	.	.													.	.	.																										.	.													.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.													.	.	.																										.	.													.	.	.	.	.	.	.	.	.
Query Sequence		P	E	R	T	G	Y	F	L	L	L	Q	H	E	D	E	.	.	V	L	L	A	Q	R	P	P	S	G	L	W	.	.	.	G	G	L	Y	C	F	P	Q	F	A	D	E	E	S	L	R	Q	W	L	A	Q	R	Q	I	A	.	.	A	D	N	L	T	Q	L	T	A	F	R	H	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.													.	.	.																										.	.													.	.	.	.	.	.	.	.	.
Alig confidence																	.	.							.						.	.	.																										.	.													.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		R	R	T	V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	.	G	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	R	Q	D	D	W	V	I	D	D	C	I	G	N	W	W	R	P	N	F	E	P	P	Q	Y	P
Template Known Secondary structure													S	S	S										.	S	T	T					S						T	T																																		S	S	S	S			B	S
Template Predicted Secondary structure																									.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
						293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.	.																					.	.
Query SS confidence		.	.	.	.																					.	.
Query Sequence		.	.	.	.	T	F	S	H	F	H	L	D	I	V	P	M	W	L	P	V	S	S	F	T	.	.	G	C	M	D	E	G	N	A	L	W	Y	N	L	A	Q	P	P	S
Query Conservation		.	.	.	.																					.	.
Alig confidence		.	.	.	.																					.	.
Template Conservation
Template Sequence		Y	I	P	A	H	I	T	K	P	K	E	H	K	K	L	F	L	V	Q	L	Q	E	K	A	L	F	A	V	P	K	N	Y	K	L	V	A	A	P	L	F	E	L	Y	D
Template Known Secondary structure		S			T	T		S			S												S	S							T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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