Job Description P17802 Confidence 98.87% Date Thu Jan 5 11:36:16 GMT 2012 Rank 91 Aligned Residues 120 % Identity 17% Template c2i6kA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1; PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog Resolution 2.00 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.						.	.	.					.	.	.	.	260	.	.	.	.	.										.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																														.	.	.	.	.				.	.	.	.											.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																														.	.	.	.	.				.	.	.	.											.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		K	Q	T	L	P	E	R	T	G	Y	F	L	L	L	Q	H	E	D	E	V	L	L	A	Q	R	P	P	S	.	.	.	.	.	G	L	W	.	.	.	.	G	G	L	Y	C	F	P	Q	F	A	.	.	.	.	.	.	.	.	.	D	E	E	S	L	R	Q	W	L	A	Q	R	Q	I	A	A	D	N	.	.	.
Query Conservation																														.	.	.	.	.				.	.	.	.											.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																														.	.	.	.	.				.	.	.	.											.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		E	K	G	L	L	H	R	A	F	S	V	F	L	F	N	T	E	N	K	L	L	L	Q	Q	R	S	D	A	K	I	T	F	P	G	C	F	T	N	T	C	C	S	H	P	L	S	N	P	A	E	L	E	E	S	D	A	L	G	V	R	R	A	A	Q	R	R	L	K	A	E	L	G	I	P	L	E	E	V	P	P
Template Known Secondary structure		T	T	T													T	T										T	T		S	S	S	T	T				S	S						B	S	S	T	T	T	S			G	G	G																			G	G	G	S		G
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
				284	.	.	.	.	.	290	.	.	.	.	.								.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330										.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	L	T	Q	L	T	A	F	R	H	T	F	S	.	.	.	.	.	.	.	H	F	H	L	D	I	V	P	M	W	L	P	V	S	S	F	T	G	C	M	D	E	G	N	A	L	W	Y	N	L	A	Q	P	P	S	.	.	.	.	.	.	.	.	.	V	G	L	A	A	P	V	E	R	L	L	Q	Q	L
Query Conservation		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	I	N	Y	L	T	R	I	H	Y	K	A	Q	S	D	G	I	W	G	E	H	E	I	D	Y	I	L	L	V	R	X	N	V	T	L	N	P	D	P	N	E	I	K	S	Y	C	Y	V	S	K	E	E	L	K	E	L	L	K	K	A	A	S	G	E	I	K	I	T	P	W	F	K	I	I	A	A	T	F
Template Known Secondary structure		G	G													S	S	S	S	B																					T	T	T																					T	T	S	S		B											T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions