 |
Job Description | P17802 | Confidence | 98.85% | Date | Thu Jan 5 11:36:16 GMT 2012 |
Rank | 93 | Aligned Residues | 118 |
% Identity | 18% | Template | c2fmlB_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:mutt/nudix family protein; |
PDBTitle: crystal structure of mutt/nudix family protein from enterococcus2 faecalis
|
Resolution | 2.26 Å |
|
 |
  |   |
226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
|
|
. | . | . | . | . | . | . | |
|
|
250 | . | . | . | . | . | |
|
|
. | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
| . | . | . |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
Q | T | L | P | E | R | T | G | Y | F | L | L | L | Q | H | E | D | . |
. |
. |
E | V | L | L | A | Q | R | . |
. |
. |
P | P | S | G | L | W | . |
. |
. |
G | G | L | Y | C | F | P | Q | F | A | D | E | E | S | L | R | Q | W | L | A | Q | R | Q | I | A | A | D | N | L | T | Q | L | T | A | F | R | H | T | F | S | . |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   | . | . | . |   |
|
|
|   |
|
| . | . | . |   |   |   |
|
|   | . | . | . |
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |
| . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|   |
Template Sequence |   |
K | P | S | L | T | V | D | X | V | L | L | C | Y | N | K | E | A | D | Q | L | K | V | L | L | I | Q | R | K | G | H | P | F | R | N | S | W | A | L | P | G | G | F | V | N | R | N | E | S | T | E | D | S | V | L | R | E | T | K | E | E | T | G | V | V | I | S | Q | E | N | I | E | Q | L | H | S | F | S | R | P | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |
|
| S | S | S | S | T | T |
|  |  |
|
|  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| G | G | G |  |  |  |  |  |  |  |
|
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
H | F | H | L | D | I | V | P | M | W | L | P | V | S | S | F | T | G | C | M | D | E | G | N | A | L | W | Y | N | L | A | Q | P | P | S | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | A | A | P | V | E | R | L | L | Q | Q |
Query Conservation |   |
. | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |
|
|
|
|   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |   |
Template Sequence |   |
R | D | P | R | G | W | V | V | T | V | S | Y | L | A | F | I | G | E | E | P | L | I | A | G | D | D | A | K | E | V | H | W | F | N | L | E | R | H | G | Q | H | I | T | L | S | H | E | D | V | E | I | T | L | D | L | K | T | A | A | S | L | G | K | D | T | L | A | F | D | H | S | E | I | I | I | K |
Template Known Secondary structure |   |
S | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T | T |
|
| B |
| S | S | S |
| B |
| T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|