Job Description P17802 Confidence 99.92% Date Thu Jan 5 11:36:16 GMT 2012 Rank 16 Aligned Residues 152 % Identity 24% Template c1yqmA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: catalytically inactive human 8-oxoguanine glycosylase2 crosslinked to 7-deazaguanine containing dna Resolution 2.50 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	Y	K	V	W	L	S	E	V	M	L	Q	Q	T	Q	V	A	T	V	I	P	Y	F	E	R	F	M	A	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	V	T	D	L	A	N	A	P	L	D	E	V	L	H	L	W	T	G	L	G	Y	Y	A	R	A	R	N	L	H	K	A	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.						.	.
Template Conservation																																																																	.						.	.
Template Sequence		D	P	I	E	C	L	F	S	F	I	C	S	S	C	N	N	I	A	R	I	T	G	M	V	E	R	L	C	Q	A	F	G	P	R	L	I	Q	L	D	D	V	T	Y	H	G	F	P	S	L	Q	A	L	A	G	P	E	V	E	A	H	L	R	K	.	L	G	L	G	Y	.	.	R	A	R	Y	V	S	A	S	A
Template Known Secondary structure												T	T	T	T																		S							T	T													T	S	T	T								.	T	T		T	T	.	.
Template Predicted Secondary structure																																																																	.						.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.			.	.	.	.	.	.	210	.	.
		94	.	.	.	.	.	100	.	.	.	.											.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																														.																								.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																														.																								.	.	.	.	.
Query Sequence		Q	Q	V	A	T	L	H	G	G	K	F	.	.	.	.	.	.	.	.	.	.	P	E	T	F	E	E	V	A	A	L	P	G	V	G	R	S	T	A	G	A	I	L	S	L	S	L	G	K	H	.	F	P	I	L	D	G	N	V	K	R	V	L	A	R	C	Y	A	V	S	G	W	P	G	.	.	.	.	.	K
Query Conservation													.	.	.	.	.	.	.	.	.	.																														.																								.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																														.																								.	.	.	.	.
Template Conservation
Template Sequence		R	A	I	L	E	E	Q	G	G	L	A	W	L	Q	Q	L	R	E	S	S	Y	E	E	A	H	K	A	L	C	I	L	P	G	V	G	T	Q	V	A	D	C	I	C	L	M	A	L	D	K	P	Q	A	V	P	V	D	V	H	M	W	H	I	A	Q	R	D	Y	S	W	H	P	T	T	S	Q	A	K	G	P	S
Template Known Secondary structure								S		S							T	T	S	S										T	T	S	T	T														S	S		T	T																					S	S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	V	E	N	K	L	W	S	L	S	E	Q	V	T	P	A	V	G	V	E	R	F	N	Q	A	M
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		P	Q	T	N	K	E	L	G	N	F	F	R	S	L	W	G	P	.	Y	A	G	W	A	Q	A	V	L
Template Known Secondary structure																		T	.	T
Template Predicted Secondary structure																			.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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