Job Description P17802 Confidence 99.81% Date Thu Jan 5 11:36:16 GMT 2012 Rank 24 Aligned Residues 142 % Identity 20% Template c1mpgB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii; PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli Resolution 1.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		I	D	K	T	P	Y	K	V	W	L	S	E	V	M	L	Q	Q	T	Q	V	A	T	V	I	P	Y	F	E	R	F	M	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	T	V	T	D	L	A	N	A	P	L	D	E	V	L	H	L	W	T	G	L	G	Y	Y	A	.	R	A	R	N	L	H	K
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.							.
Template Conservation																																																																.	.	.	.
Template Sequence		G	C	V	D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	.	.	.	.	A	L	G	M	P	L	K	R	A	E	A	L	I	H
Template Known Secondary structure				S												T	T	T	S																	S		B		S	S	S	T	T		B										S	S							.	.	.	.		T	T	S
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.
		92	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																																			.					.
Query SS confidence										.	.	.	.	.																																			.					.
Query Sequence		A	A	Q	Q	V	A	T	L	.	.	.	.	.	H	G	G	K	F	P	E	T	F	E	E	V	A	A	L	P	G	V	G	R	S	T	A	G	A	I	L	S	L	S	L	G	K	H	.	F	P	I	L	.	D	G	N	V	K	R	V	L	A	R	C	Y	A	V	S	G	W	P	G	K	K	E	V	E	N	K	L
Query Conservation										.	.	.	.	.																																			.					.
Alig confidence										.	.	.	.	.																																			.					.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I	K	Q	R	F	P	G	M	.	.	.	.	.	.	.	.	.	.	.	T	P	A	Q	I
Template Known Secondary structure									T		S		S	S			S											T	S	T	T														S			S	S				T	T								S	T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.												.	250	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	S	L	S	E	Q	V	T	P	A	V	G	V	E	R	F	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I
Template Known Secondary structure						G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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