Return to main results Retrieve Phyre Job Id

Job DescriptionP0C054
Confidence99.93%DateThu Jan 5 11:29:40 GMT 2012
Rank1Aligned Residues136
% Identity19%Templated1gmea_
SCOP infoHSP20-like chaperones HSP20-like chaperones HSP20
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.... ....10.........20.........30.. .......40.........50.........60....... ..70...
Predicted Secondary structure 




.















.....











.
Query SS confidence 




.


























. . . . .


































.





Query Sequence  MRNFD. LSPLYRSAIGFDRLFNHLENNQSQSNG. . . . . GYPPYNVELVDENHYRIAIAVAGFAESELEITAQD. NLLVVK
Query Conservation 

  
.  
  
    

 
             .....  

  
  
 
    
   


   


 
    .  
 
 
Alig confidence 




.


























.....






.


























.





Template Conservation   
     
 
                                 

. 
      
   


   


 
 
     
 
 
Template Sequence  VRRSNVFDPFADLWADPFDTFRSIVPAISGGGSETAAFANARMDW. KETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVS
Template Known Secondary structure 

S


B
TT
GGGSSGGGTTSS

SGGG
.
SS
TT

GGGTTT
Template Predicted Secondary structure 





















.










Template SS confidence 















































































   4.....10.........20.........30.........40........ .50.........60.........70.........80..
 
   74.... .80.........90.........100...... ...110.........120.........130.......
Predicted Secondary structure 


..










..












Query SS confidence 




. .



























. .






























Query Sequence  GAHAD. . EQKERTYLYQGIAERNFERKFQLAENIH. . VRGANLVNGLLYIDLERVIPEAKKPRRIEIN
Query Conservation       ..                
 
   

   
..   
   



 




   
  
 


 
 
Alig confidence 




..



























..






























Template Conservation                   
     
 
   

  

   
 
   



 
  

          
 
 
Template Sequence  GERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQIS
Template Known Secondary structure 







TT


S








SS


GGG
TT




TT







Template Predicted Secondary structure 


























Template SS confidence 



































































   83......90.........100.........110.........120.........130.........140.........150
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions