Job Description P0C054 Confidence 96.48% Date Thu Jan 5 11:29:40 GMT 2012 Rank 17 Aligned Residues 75 % Identity 16% Template c3eudE_ PDB info PDB header:nuclear protein Chain: E: PDB Molecule:protein shq1; PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p Resolution 2.40 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110
Predicted Secondary structure																										.	.																																															.	.	.
Query SS confidence																										.	.																																															.	.	.
Query Sequence		P	Y	N	V	E	L	V	D	E	N	H	Y	R	I	A	I	A	V	A	G	F	A	E	S	.	.	E	L	E	I	T	A	Q	D	N	L	L	V	V	K	G	A	H	A	D	E	Q	K	E	R	T	Y	L	Y	Q	G	I	A	E	R	N	F	E	R	K	F	Q	L	A	E	N	I	.	.	.	H	V	R	G	A
Query Conservation																										.	.																																															.	.	.
Alig confidence																										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	F	S	I	T	Q	D	E	E	F	I	F	L	K	I	F	I	S	N	I	R	F	S	A	V	G	L	E	I	I	I	Q	E	N	X	I	I	F	H	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Y	L	R	L	R	F	P	H	E	L	I	D	D	E	R	S	T	A
Template Known Secondary structure										S	S										S					S	S	S							T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S	S					S	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		111	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		N	L	.	.	V	N	G	L	L	Y	I	D	L	E	R	V	I	P	E	A
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		Q	Y	D	S	K	D	E	C	I	N	V	K	V	A	K	L	N	K	N	E
Template Known Secondary structure					T	T	T	T									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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