|   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
. | . | . | 110 | . | . | |
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . |  |  |  |  |  |  | . |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
|
|
|
|
Query Sequence |   |
E | L | V | D | E | N | H | Y | R | I | A | I | A | V | A | G | F | A | E | S | E | L | E | I | T | A | Q | D | N | L | L | V | V | K | G | A | H | A | D | E | Q | K | E | R | T | Y | L | Y | Q | G | I | A | E | R | N | F | E | R | K | F | Q | L | A | E | N | I | H | . |
. |
V | R | G | A | N | L | . |
V | N | G | L |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |
| . | . |   |   |   |
|   |   | . |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |
|   |
|   |   |
|
|
|
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |
|
|
|
Template Sequence |   |
V | P | T | D | P | G | Y | F | S | V | L | L | D | V | K | H | F | S | P | E | E | I | S | V | K | V | V | G | D | H | V | E | V | H | A | R | H | E | E | R | P | D | E | . |
. |
. |
. |
. |
H | G | F | I | A | R | E | F | H | R | R | Y | R | L | P | P | G | V | D | P | A | A | V | T | S | A | L | S | P | E | G | V |
Template Known Secondary structure |   |
|
|
|
| S | S |
|  |  |  |  |  |  |
| T | T | S |
| G | G | G |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
| S | S | T | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |
|
| T | T | B |
| T | T |
|
|  |  |  |  |
| T | T | S |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | I | D | L | E | R | V | I | P | E | A | K | K | P |
Query Conservation |   |
|   |
|
|
|
|
|   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |
|
Template Sequence |   |
L | S | I | Q | A | T | P | A | S | A | Q | A | S | L | P |
Template Known Secondary structure |   |
 |  |  |  |  |
| B |
|
|
|
|
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |