|   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
L | T | T | A | E | Q | V | G | K | W | A | A | R | H | I | V | N | R | I | N | A | F | K | P | T | A | D | R | P | F | V | L | G | L | P | T | G | G | T | P | M | T | T | Y | K | A | L | V | E | M | H | K | A | G | Q | V | S | F | K | H | V | V | T | F | N | M | D | E | Y | V | G | L | P | K | E | H | P | E | S | Y |
Query Conservation |   |
  |   |   |   |   |
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|   |   |   |   |
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|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |
|   |
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|   |   |   |   |   |   |
|   |
Alig confidence |   |
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| . |
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| . | . | . | . |
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| . |
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Template Conservation |   |
  |
|   |   |   |
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|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   | . |   |   |   |
|   |
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|   |   |   |
|   |   |
|   |   |   | . | . | . | . |   |
|   |
|   |   |
|   |   |
|   |   |
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|   | . |
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|   |   |   |   |   |
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Template Sequence |   |
Q | E | G | R | Q | R | L | A | E | R | L | A | D | T | V | A | Q | A | L | E | A | D | L | A | K | R | E | . |
R | A | L | L | V | V | S | G | G | S | T | P | K | P | F | F | T | S | L | A | A | K | . |
. |
. |
. |
A | L | P | W | A | R | V | D | V | T | L | A | D | E | R | W | . |
V | T | A | D | D | A | D | S | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | . |
|  |  |  |  |  |
|
| S | S | T | T |  |  |  |  |  |  |  |  | T | S | . | . | . | . |
| S |
| G | G | G |  |  |  |  |  | S |  |  |  | S | . | S |
| T | T | S | T | T |
|  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
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|  |  |  |  |  |  |  |  |
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| . |
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Template SS confidence |   |
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  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
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. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
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|  |  |  |
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|  |  |  |
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|  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
Y | S | F | M | H | R | N | F | F | D | H | V | D | I | P | A | E | N | I | N | L | L | N | G | N | A | P | D | I | D | A | E | C | R | Q | Y | E | E | K | I | R | S | Y | . |
G | K | I | H | L | F | M | G | G | V | G | N | D | G | H | I | A | F | N | E | P | A | S | S | L | A | S | R | T | R | I | K | T | L | T | H |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . |   |   |   |
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|   |
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|   |
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|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
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| . |
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| . |
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| . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   | . |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
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|   |
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|   |
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|   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |
Template Sequence |   |
A | R | L | V | R | E | T | L | L | V | G | P | . |
A | A | E | A | C | F | H | P | L | T | T | D | D | D | T | P | E | A | G | V | E | T | V | A | E | R | L | E | S | L | P | W | P | A | S | A | V | I | L | G | X | G | G | D | G | H | T | A | S | L | F | P | D | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | Q | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | S | S | G | G | . | G | G | G | S |  |  |  |
| S |
|
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| S | S | B | S |  |  |  |  |
|
|
| T | T | S |
| B | T | T | B |
| T | T |
| . | . | . | . | . | . | . | . | . | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . |
|
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|
|  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |
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| . | . | . | . | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
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  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | |
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
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. | . | . | . |
  |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
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|  |  |  |  |  |
|  |  |  |  |  |
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|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
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|  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
D | T | R | V | A | N | S | R | F | F | D | N | D | V | N | Q | V | P | K | Y | A | L | T | V | G | V | G | T | L | L | D | A | E | E | V | M | I | L | V | L | G | S | Q | K | A | L | A | L | Q | A | A | V | E | G | C | V | N | H | M | W | T | I | S | C | L | Q | L | H | P | K | A | I | M | V | C |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
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|   |   |   |
|   |   |
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|   |
|   |   |   |   |   |
|   |   |
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|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
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|   |
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
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|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
T | A | L | E | T | T | S | A | A | V | V | V | H | A | P | S | V | P | Q | A | R | I | T | L | S | A | S | R | L | A | D | A | G | L | H | V | L | H | I | T | G | N | D | K | R | R | V | L | A | E | A | L | A | G | D | D | V | R | Q | L | P | I | R | A | F | L | S | Q | P | I | A | T | Y | W | A |
Template Known Secondary structure |   |
 |  |  |  |
|
| S | S |  |  |  |  |
|
| T | T | S | S | S |
|  |  |  |  |
|  |  |  |  | T |
| B | S |
|  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T | S | T | T |  |  |  |  | T | S |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |
|
Template SS confidence |   |
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  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
  |