 |
Job Description | P0A759 | Confidence | 11.36% | Date | Thu Jan 5 11:04:54 GMT 2012 |
Rank | 70 | Aligned Residues | 50 |
% Identity | 18% | Template | c1dd9A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:dna primase; |
PDBTitle: structure of the dnag catalytic core
|
Resolution | 1.60 Å |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | I | P | L | T | T | A | E | Q | V | G | K | W | A | A | R | H | I | V | N | R | I | N | A | F | K | P | T | A | D | R | P | F | V | L | G | L | P | T | G | G | T | P | M | T | T | Y | K | A |
Query Conservation |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|   |
|   |
|
|   |
|   |   |
Template Sequence |   |
N | V | I | C | C | Y | D | G | D | R | A | G | R | D | A | A | W | R | A | L | E | T | A | L | P | Y | M | T | D | G | R | Q | L | R | F | M | F | L | P | D | G | E | D | P | D | T | L | V | R | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
| T | T |
|  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|