Return to main results Retrieve Phyre Job Id

Job DescriptionP76421
Confidence44.58%DateThu Jan 5 12:22:55 GMT 2012
Rank20Aligned Residues78
% Identity24%Templated2j78a1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Family 1 of glycosyl hydrolase
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110..... ....120.... .....130.........140.........150.
Predicted Secondary structure 
















....


..





Query SS confidence 





































. . . .








. .


























Query Sequence  RIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRN. . . . WQLSRENGL. . LRGAYHYFSPSVSASVQARLFLQTVDF
Query Conservation   


  
        

 








    
  
  
....   
  


.. 





      
  

  

  
  
Alig confidence 






................














....








..






....................
Template Conservation 

 



................ 
 
 
  
  

  
   

 
   

 




 
 ....................
Template Sequence  SISWPRI. . . . . . . . . . . . . . . . LPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHW. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

................STTSSS


TT
SS....................
Template Predicted Secondary structure 


................















....................
Template SS confidence 















































































   7980..... ....90.........100.........110.........120..
 
   152.......160.........170.........180.........190......
Predicted Secondary structure 












Query SS confidence 












































Query Sequence  SQGDFPAVLDVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYS
Query Conservation      

  



                
   
    
  
 


Alig confidence  ...





..

































Template Conservation  ...


  
..   


     
  
  

      


 
  
 
Template Sequence  . . . DLPFAL. . QLKGGWANREIADWFAEYSRVLFENFGDRVKNWI
Template Known Secondary structure  ...

B..TTTGGGSTTTTT

Template Predicted Secondary structure  ...


..









Template SS confidence 












































   123..... .130.........140.........150.........160..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions