Job Description P76421 Confidence 100.00% Date Thu Jan 5 12:22:55 GMT 2012 Rank 2 Aligned Residues 199 % Identity 36% Template d1jfxa_ SCOP info TIM beta/alpha-barrel (Trans)glycosidases 1,4-beta-N-acetylmuraminidase Resolution 1.65

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		S	Y	T	I	H	G	I	D	V	S	R	W	Q	E	R	I	D	W	Q	R	V	A	K	M	R	D	N	G	I	R	L	Q	F	A	F	I	K	A	T	E	G	E	K	L	V	D	P	Y	F	S	R	N	W	Q	L	S	R	E	N	G	L	L	R	G	A	Y	H	Y	F	S	P	.	S	V	S	A	S	V	Q	A
Query Conservation																																																																									.
Alig confidence																									.	.	.	.	.																																												.
Template Conservation																									.	.	.	.	.
Template Sequence		T	S	G	V	Q	G	I	D	V	S	H	W	Q	G	S	I	N	W	S	S	V	K	S	.	.	.	.	.	A	G	M	S	F	A	Y	I	K	A	T	E	G	T	N	Y	K	D	D	R	F	S	A	N	Y	T	N	A	Y	N	A	G	I	I	R	G	A	Y	H	F	A	R	P	N	A	S	S	G	T	A	Q	A
Template Known Secondary structure				S	S							G	G	G		S									.	.	.	.	.	T	T											T	T	T				T	T											T	T											T	T	T	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210
Predicted Secondary structure															.	.	.												.	.	.	.	.	.																																							.	.	.
Query SS confidence															.	.	.												.	.	.	.	.	.																																							.	.	.
Query Sequence		R	L	F	L	Q	T	V	D	F	S	Q	G	D	.	.	.	F	P	A	V	L	D	V	E	E	R	G	.	.	.	.	.	.	K	L	S	A	K	E	L	R	K	R	V	S	Q	W	L	K	M	V	E	K	S	T	G	K	K	P	I	I	Y	S	G	A	V	F	Y	H	T	N	.	.	.	L	A	G	Y	F	N
Query Conservation															.	.	.												.	.	.	.	.	.																																							.	.	.
Alig confidence															.	.	.												.	.	.	.	.	.																																							.	.	.
Template Conservation
Template Sequence		D	Y	F	A	S	N	G	G	G	W	S	R	D	N	R	T	L	P	G	V	L	D	I	E	H	N	P	S	G	A	M	C	Y	G	L	S	T	T	Q	M	R	T	W	I	N	D	F	H	A	R	Y	K	A	R	T	T	R	D	V	V	I	Y	T	T	A	S	W	W	N	T	C	T	G	S	W	N	G	M	A	A
Template Known Secondary structure							T	T						S	S	S	B									S		S	S	S		T	T	T	T																						S	S																T	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		E	Y	P	W	W	V	A	H	Y	Y	Q	R	R	P	.	.	D	N	D	G	M	A	W	R	F	W	Q	H	S	D	R	G	Q	V	D	G	I	N	G	P	V	D	F	N	V	F	N	G	T	V	E	E	L	Q	A	F	V	D	G
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		K	S	P	F	W	V	A	H	W	G	V	S	A	P	T	V	P	S	G	F	P	T	W	T	F	W	Q	Y	S	A	T	G	R	V	G	G	V	S	G	D	V	D	R	N	K	F	N	G	S	A	A	R	L	L	A	L	A	N	N
Template Known Secondary structure		T								T	T		S	S					T	T	S	S	S		S											T	T											S	S											T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions