Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADT5
Confidence90.91%DateThu Jan 5 11:21:48 GMT 2012
Rank59Aligned Residues207
% Identity11%Templatec3se7A_
PDB info PDB header:ligaseChain: A: PDB Molecule:vana; PDBTitle: ancient vana
Resolution3.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180...... ...190.........200.........210 .........220.....
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Query Sequence  LLHLTCCRDTVEDR. . . GTIQYLQDCATEAEIATEFLYIDD. . . . . IGLGEKGQFTDLQDQ. . . . . . . . . . . . . . . . . . .
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Template Sequence  KIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSPDRSVHGLLVLEQG
Template Known Secondary structure 
SSTTS
TTT
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S
SSSSSSSS




TTT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   226...230.........240.........250...... ...260. ........270..... ....280.........290.....
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Query Sequence  . . . . . VISNLFKLYPWEFMLREMFSTKLEDAGVRWL. EPAWK. SIISNKALLPLLWE. . . MFPNHPNLLPAYFAEDDHPQ
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Template Conservation         
 
                 
                   

      
   

  
         
      
Template Sequence  KYETIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVTADEKIPTDQL
Template Known Secondary structure 
S


STTTTSS


BSS

STT
B


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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   296...300.........310.........320.........330.........340.........350.........360.........370.....
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Query Sequence  MEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQD
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Template Sequence  TYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREYDSKVLIEEAVIGTE. . . IGCAVMGNGPELITGEVDQITLSGSDN
Template Known Secondary structure 
SSSS

TTTT

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   162.......170.........180.........190.........200.........210. ........220.........230........
 
   376...380..
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Query Sequence  MSRFYPH
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Template Conservation         
Template Sequence  SAVTVPA
Template Known Secondary structure  S
SS
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   253......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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